Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008072.1 Kokia drynarioides strain JFW-HI SEQ_122728, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  108838

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21834--21863
14
2.1
14
100
0
60
53
13
6
26
1.64
22949--22999
15
3.4
15
81
10
68
1
21
0
76
0.88
23567--23619
19
2.8
19
94
2
90
66
7
11
15
1.44
36294--36376
37
2.2
37
85
8
107
31
22
18
27
1.97
36484--36537
26
2.1
26
86
6
74
25
16
25
31
1.97
37682--37729
21
2.3
21
100
0
96
27
12
35
25
1.92
37831--37888
21
2.8
21
78
5
64
29
15
18
36
1.92
38286--38328
11
3.8
11
75
6
50
16
4
4
74
1.16
38280--38334
23
2.4
23
93
0
92
12
3
9
74
1.18
41489--41576
44
2.0
44
97
0
167
39
9
12
38
1.75
48486--48531
24
2.0
23
86
4
65
6
4
30
58
1.43
49160--49234
39
1.9
39
97
0
141
26
20
12
41
1.87
56692--56761
22
3.2
22
64
31
60
24
12
18
44
1.85
56686--56771
43
2.0
43
97
0
163
24
11
19
44
1.84
59713--59817
55
1.9
54
82
5
131
21
14
8
55
1.66
60090--60246
60
2.7
60
83
4
185
53
12
9
24
1.68
69899--70502
200
3.1
189
78
12
504
32
10
6
50
1.63
70149--70493
177
1.9
185
83
9
440
32
9
8
49
1.65
72543--72630
27
3.3
27
78
0
86
18
20
23
37
1.94
72579--72636
20
2.9
20
73
16
57
15
15
29
39
1.88
84802--84834
13
2.6
13
95
4
59
15
0
15
69
1.19
100058--100083
12
2.2
12
100
0
52
7
7
0
84
0.77
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
102449--102494
24
2.0
23
86
4
65
32
2
0
65
1.05
103204--103229
12
2.2
12
100
0
52
23
0
7
69
1.14
103922--103964
23
2.0
23
81
9
54
41
2
4
51
1.35
104905--104953
3
16.3
3
100
0
98
67
0
0
32
0.91
106175--106358
89
2.1
88
88
2
271
36
4
25
33
1.77
106232--106659
29
14.7
29
70
16
121
36
2
24
36
1.68
106357--106709
29
12.2
28
73
11
167
37
1
23
36
1.65
106234--106721
58
8.4
58
74
12
299
37
2
24
36
1.67
106408--106721
29
10.7
30
73
9
247
38
1
23
36
1.66
106233--106731
30
17.1
29
71
12
269
36
2
24
36
1.67
108052--108094
19
2.2
20
83
4
52
34
0
4
60
1.17

Tables:   1

The End!