Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008103.1 Kokia drynarioides strain JFW-HI SEQ_122761, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24678

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
88--302
30
7.3
30
74
14
144
35
3
22
38
1.72
88--292
88
2.3
88
82
5
236
34
3
21
40
1.71
1935--2136
111
1.8
111
86
4
291
42
10
19
28
1.84
2434--2510
15
5.3
14
71
14
50
3
19
0
76
0.94
2478--2504
13
2.1
13
100
0
54
0
22
0
77
0.76
2438--2509
20
3.7
18
73
19
56
4
16
0
79
0.89
6932--6974
12
3.5
12
81
15
52
65
2
6
25
1.30
7042--7200
30
5.3
30
75
6
151
35
2
21
40
1.67
7042--7201
61
2.6
61
76
10
157
36
2
21
40
1.67
10637--10683
24
2.0
24
91
0
76
55
8
10
25
1.62
10641--10699
24
2.5
24
82
0
73
55
10
6
27
1.58
16467--16512
18
2.4
20
78
10
60
60
4
0
34
1.16
20307--20360
22
2.5
22
81
6
65
72
7
0
20
1.08
22560--22745
29
6.3
29
79
5
160
32
2
30
34
1.72
22606--22745
30
4.8
29
87
3
208
32
1
31
35
1.67
22572--22745
59
2.9
59
89
0
258
32
2
30
34
1.73
23273--23297
13
1.9
13
100
0
50
44
32
0
24
1.54
23745--23782
12
3.3
12
85
10
53
34
0
0
65
0.93

Tables:   1

The End!