Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01000811.1 Kokia drynarioides strain JFW-HI SEQ_111892, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  108639

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4032--4221
94
2.0
93
86
3
265
39
9
18
32
1.83
4977--5016
21
1.9
21
94
0
71
42
0
55
2
1.13
4980--5017
12
3.2
12
88
0
58
44
0
52
2
1.14
7899--7936
19
2.1
19
85
5
51
31
2
7
57
1.41
11531--11585
28
2.0
28
88
0
83
40
3
20
36
1.70
18236--18288
26
2.0
26
85
7
72
60
5
7
26
1.46
18239--18295
26
2.2
26
81
6
62
61
7
5
26
1.43
26390--26436
18
2.6
18
83
13
60
36
2
0
61
1.08
27756--27807
26
2.0
27
84
3
70
25
7
3
63
1.38
28534--28583
10
5.2
10
79
16
52
74
2
10
14
1.16
45438--45490
25
2.0
26
85
7
72
15
5
0
79
0.91
47567--47722
28
5.6
28
64
13
70
26
19
22
31
1.98
47549--47754
111
1.8
112
87
3
308
27
19
22
30
1.98
47456--47782
56
5.9
56
79
2
307
26
18
22
32
1.97
49254--49307
18
3.0
18
77
0
63
27
3
42
25
1.72
53806--53848
22
2.0
22
86
8
63
51
18
4
25
1.66
63208--63239
17
1.9
17
93
6
57
18
12
18
50
1.78
76810--76859
6
8.8
6
78
12
61
80
0
20
0
0.72
76804--76854
16
3.1
16
77
11
50
76
0
21
1
0.88
76810--76859
11
4.5
11
78
12
57
80
0
20
0
0.72
79483--79667
51
3.6
51
81
5
223
31
11
24
31
1.92
79483--79667
102
1.8
101
83
6
248
31
11
24
31
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
95353--95404
26
2.0
26
85
7
70
61
1
1
34
1.18
96584--96636
19
2.8
19
72
11
56
64
3
1
30
1.22
96848--96944
10
10.4
9
71
16
56
36
1
4
58
1.24
96846--96900
28
2.0
28
82
7
67
34
1
5
58
1.32
96843--96944
47
2.2
47
82
5
118
36
0
3
58
1.23
96846--96961
9
12.4
9
70
10
72
34
0
3
61
1.19
96913--96961
10
5.2
10
80
11
59
30
0
0
69
0.89
98068--98129
26
2.5
24
77
17
63
32
1
0
66
1.02
104159--104209
11
4.6
11
77
0
57
7
5
15
70
1.30
104157--104206
22
2.3
22
85
0
64
8
6
16
70
1.32
107574--107659
6
15.0
6
70
18
58
41
0
3
54
1.17
107574--107653
17
4.7
17
82
0
106
41
0
3
55
1.18
107670--107695
13
2.0
13
100
0
52
46
23
7
23
1.78
108299--108366
3
22.3
3
72
14
50
55
0
5
38
1.24
108313--108366
15
3.6
14
80
9
63
57
0
5
37
1.22

Tables:   1

The End!