Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008112.1 Kokia drynarioides strain JFW-HI SEQ_122770, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22426

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7578--7626
14
3.3
15
76
21
50
61
6
10
22
1.50
7775--8122
29
11.9
30
76
12
224
37
3
24
35
1.73
7774--8104
59
5.6
58
75
12
239
37
3
24
34
1.73
7775--8104
89
3.7
87
77
12
255
37
3
24
34
1.73
9956--10366
30
13.4
30
78
8
373
38
1
25
34
1.64
9947--10366
89
4.6
89
78
11
357
38
1
25
35
1.65
10146--10282
70
2.0
70
89
0
211
41
2
24
31
1.67
12296--12463
85
2.0
86
83
3
214
26
22
16
35
1.94
12289--12992
209
3.4
207
84
1
861
24
21
16
38
1.93
12920--13039
48
2.5
48
86
5
163
25
24
13
36
1.92
12713--13204
256
1.9
256
89
1
772
23
21
16
37
1.93
12965--13123
85
1.9
85
85
2
221
23
24
14
37
1.93
13167--13273
37
2.9
37
91
0
160
21
21
19
37
1.95
13012--13610
197
3.0
199
84
4
720
23
21
17
37
1.94
13214--13693
210
2.3
209
84
0
618
23
21
17
37
1.94
13782--14467
99
7.0
99
75
7
311
19
30
16
33
1.94
13851--14456
49
12.3
50
75
4
354
19
30
16
33
1.94
13927--14470
147
3.7
144
79
6
502
20
30
16
33
1.94
13852--14467
246
2.5
246
83
1
734
19
30
15
33
1.94
16254--16287
4
8.2
4
87
6
50
0
20
0
79
0.73
16252--16287
8
4.2
9
89
10
58
0
22
0
77
0.76
16254--16287
17
2.1
16
94
5
59
0
20
0
79
0.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21172--21489
30
10.8
29
81
6
291
37
3
23
36
1.72
21387--21510
59
2.1
60
83
4
153
41
5
20
32
1.76
21284--21547
60
4.4
59
78
6
169
37
4
23
34
1.75
21415--21547
30
4.5
30
75
4
110
39
6
20
33
1.77

Tables:   1

The End!