Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008124.1 Kokia drynarioides strain JFW-HI SEQ_122782, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48426

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
403--511
23
4.8
23
81
8
125
16
20
21
42
1.89
403--511
44
2.4
45
81
10
132
16
20
21
42
1.89
8190--8272
27
3.0
28
76
15
91
31
18
24
26
1.97
8209--8292
27
3.1
27
81
3
105
29
17
25
27
1.98
8202--8308
28
3.8
28
81
6
119
28
17
25
28
1.98
8380--8504
29
4.5
28
78
9
107
29
18
26
25
1.98
8404--8504
25
3.8
26
81
5
96
29
16
27
25
1.97
10796--10834
20
2.0
20
84
0
51
33
7
25
33
1.84
13662--13703
20
2.1
20
95
0
75
28
7
30
33
1.84
13670--13717
20
2.4
20
85
0
60
33
10
29
27
1.90
13916--13974
20
3.0
20
89
0
91
32
10
28
28
1.90
29623--29673
23
2.3
23
79
3
59
56
1
19
21
1.51
30072--30105
4
8.5
4
100
0
68
23
0
0
76
0.79
34050--34241
95
2.0
95
98
0
375
51
22
1
24
1.57
41685--41779
49
2.0
48
93
2
163
29
14
9
46
1.76
43328--43369
22
1.9
22
85
9
59
30
21
11
35
1.90

Tables:   1

The End!