Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008150.1 Kokia drynarioides strain JFW-HI SEQ_122809, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32618

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5422--5637
95
2.3
95
81
3
254
31
13
29
25
1.94
6015--6247
59
3.9
59
76
8
206
41
21
3
33
1.71
5983--6228
30
8.3
30
78
7
164
39
21
4
34
1.73
6009--6254
30
8.3
30
81
4
216
39
21
4
33
1.74
6279--6323
21
2.2
21
92
4
74
26
2
4
66
1.22
10740--10779
21
1.9
21
85
10
55
77
0
15
7
0.98
11084--11301
112
1.9
112
87
1
321
27
20
14
38
1.91
12130--12373
97
2.5
96
88
1
346
33
13
29
24
1.93
12475--13094
42
15.5
42
72
12
366
29
25
18
26
1.98
12567--12630
33
1.9
33
90
0
101
26
21
21
29
1.99
12489--12710
113
1.9
115
87
3
322
27
24
20
27
1.99
12662--12913
124
2.0
124
90
4
402
30
22
19
28
1.98
12675--12857
82
2.2
83
80
3
208
28
25
16
28
1.97
12799--13094
79
3.7
79
83
1
367
31
26
16
26
1.97
12676--13095
40
10.4
40
73
6
251
30
25
17
26
1.97
14763--15070
30
10.3
30
71
10
202
38
17
6
37
1.75
14815--15061
60
4.2
60
78
10
231
39
17
6
37
1.75
14815--15000
60
3.1
60
87
2
259
39
16
6
37
1.75
14914--15044
29
4.4
29
79
6
106
35
16
6
40
1.76
15095--15141
22
2.2
21
88
3
67
25
2
6
65
1.27
15087--15149
30
2.1
29
82
11
74
26
1
6
65
1.26
15131--15168
20
2.0
19
85
10
51
28
0
10
60
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24489--24531
16
2.8
16
85
3
61
67
0
11
20
1.22

Tables:   1

The End!