Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008161.1 Kokia drynarioides strain JFW-HI SEQ_122820, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59870

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--6437
428
14.9
429
79
5
5953
40
13
17
28
1.88
14--6437
216
29.8
216
80
5
6252
40
13
17
28
1.88
4077--4123
23
2.0
23
100
0
94
36
12
17
34
1.87
6617--7974
216
6.3
215
83
4
1620
39
15
16
27
1.89
21135--21177
21
1.9
23
86
13
63
30
4
2
62
1.28
22192--22339
70
2.1
71
94
1
262
36
16
9
37
1.81
25399--25467
23
3.0
22
77
10
57
34
4
2
57
1.33
35363--35403
18
2.2
20
79
20
52
12
0
31
56
1.36
35369--35403
18
1.9
19
88
11
56
14
0
31
54
1.40
36002--36057
24
2.3
25
84
6
71
28
8
16
46
1.77
37222--37325
46
2.3
45
78
5
102
39
6
24
29
1.81
38911--38935
3
8.3
3
100
0
50
32
0
0
68
0.90
39391--39424
16
2.1
16
94
0
59
52
14
11
20
1.73
51984--52049
32
2.1
32
91
2
107
31
13
24
30
1.94
52340--52426
19
4.7
17
75
20
77
32
1
0
66
0.99
52342--52435
37
2.5
38
86
10
131
34
1
0
64
1.00
54133--54177
18
2.5
18
79
13
56
37
40
2
20
1.65
55035--55292
124
2.1
123
92
0
372
51
6
4
37
1.47
55242--55289
23
2.3
22
86
13
66
64
0
2
33
1.05
55375--55429
21
2.8
20
84
13
69
49
20
0
30
1.49
56650--56693
17
2.5
17
82
10
54
56
4
0
38
1.20

Tables:   1

The End!