Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008166.1 Kokia drynarioides strain JFW-HI SEQ_122825, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  93761

Tables:   1   

This is table  1  of  1  ( 44 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8214--8241
13
2.2
13
100
0
56
35
0
7
57
1.26
8758--8790
14
2.3
15
89
5
50
30
0
3
66
1.06
8740--8791
26
1.9
27
84
7
70
32
0
5
61
1.20
8831--8881
8
6.6
8
73
8
52
68
1
1
27
1.11
8839--8899
22
3.0
20
75
13
52
65
4
3
26
1.28
8825--8878
14
3.7
15
83
11
76
68
1
1
27
1.10
8867--8931
29
2.2
29
86
0
85
63
3
3
30
1.25
9165--9216
23
2.3
22
74
12
52
53
0
1
44
1.11
9171--9203
12
2.9
12
91
8
52
54
0
0
45
0.99
9170--9215
11
3.9
12
77
13
51
56
0
2
41
1.11
9292--9351
21
3.1
21
64
26
60
60
8
0
31
1.27
11880--11938
21
3.0
20
85
7
75
32
5
6
55
1.48
12926--13017
30
3.1
30
91
0
148
28
5
4
61
1.37
12938--12982
23
2.0
23
82
8
56
31
4
4
60
1.37
13943--13993
18
2.9
18
91
2
77
29
7
0
62
1.23
13992--14141
54
2.7
55
85
5
196
31
15
19
34
1.93
14999--15030
2
16.0
2
100
0
64
50
0
0
50
1.00
17291--17545
72
3.6
72
85
4
345
53
15
5
25
1.63
17977--18046
18
3.9
18
83
7
97
38
10
10
41
1.72
27384--27423
22
1.9
20
90
10
62
27
0
2
70
1.01
29528--29565
18
2.0
20
85
10
53
44
13
13
28
1.81
29940--30177
23
10.3
23
87
0
314
47
13
3
34
1.61
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31265--31352
17
5.1
17
80
5
95
36
1
4
57
1.26
31259--31361
6
17.2
6
68
11
50
39
0
3
55
1.25
31265--31352
36
2.5
34
82
7
113
36
1
4
57
1.26
32026--32105
3
26.0
3
82
7
90
63
0
2
33
1.08
33527--33743
30
7.3
29
80
4
211
33
22
4
40
1.74
33512--33727
59
3.7
59
85
1
245
33
20
5
39
1.76
37101--37958
23
37.3
23
87
0
1090
47
13
4
34
1.63
38763--38800
19
2.0
19
94
0
67
39
15
13
31
1.86
41411--41449
20
2.0
20
89
0
60
23
0
2
74
0.94
42035--42093
22
2.7
21
71
10
55
16
0
6
76
1.00
53218--53262
20
2.2
20
88
7
65
42
11
6
40
1.67
53796--53826
13
2.4
13
94
0
53
35
22
6
35
1.80
56884--57103
19
11.7
19
82
1
237
22
28
17
26
1.95
56885--57103
56
3.9
57
79
1
244
22
28
17
26
1.95
57109--57173
18
3.6
18
87
0
103
36
26
18
18
1.94
83200--83256
17
3.4
17
75
15
64
17
21
10
50
1.75
83919--84020
51
2.0
51
100
0
204
31
7
17
43
1.78
86119--86148
15
2.0
15
93
0
51
20
23
26
30
1.98
89557--89591
12
2.9
12
91
0
52
77
2
2
17
1.02
89557--89595
17
2.4
17
87
12
55
79
2
2
15
0.95
93663--93711
12
4.0
12
92
5
71
40
0
4
55
1.19
93663--93718
13
4.5
13
93
2
71
39
0
3
57
1.16

Tables:   1

The End!