Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008171.1 Kokia drynarioides strain JFW-HI SEQ_122830, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  97301

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
395--420
2
13.0
2
100
0
52
50
0
0
50
1.00
5047--5182
68
2.0
68
97
0
254
34
15
18
31
1.92
13692--13733
17
2.4
18
92
7
70
90
0
9
0
0.45
19026--19065
20
1.9
20
85
10
53
55
2
0
42
1.13
23016--23061
21
2.1
22
84
11
60
52
2
6
39
1.40
31723--31760
18
2.1
18
85
9
51
26
5
15
52
1.64
31804--31848
23
2.0
23
86
0
63
35
20
13
31
1.91
36336--36374
4
10.0
4
88
5
62
0
48
0
51
1.00
44169--44195
11
2.5
11
100
0
54
55
7
29
7
1.55
46819--46896
38
2.0
39
83
11
99
58
3
3
33
1.34
47177--47269
10
9.6
10
66
19
54
30
3
3
63
1.26
47078--47268
19
10.0
18
66
18
77
30
4
3
61
1.32
47103--47225
55
2.2
58
84
10
157
30
4
2
61
1.30
47331--47551
88
2.5
88
89
2
336
29
9
23
37
1.86
52209--52257
22
2.2
22
85
7
64
22
2
12
63
1.39
56656--56695
3
13.3
3
100
0
80
32
32
0
35
1.58
57449--57560
56
2.0
56
94
0
197
36
12
15
35
1.85
58932--58961
13
2.3
13
100
0
60
16
0
0
83
0.65
58932--58960
7
4.3
7
91
8
51
13
0
0
86
0.58
63464--63548
31
2.7
31
100
0
170
21
16
22
40
1.91
77038--77063
2
13.0
2
100
0
52
0
0
50
50
1.00
83626--83686
29
2.2
27
83
11
86
50
1
3
44
1.28
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
83633--83697
29
2.2
29
94
0
112
44
0
3
52
1.16
84461--84529
20
3.4
19
76
9
57
27
0
4
68
1.09
92674--92704
2
15.5
2
100
0
62
51
0
0
48
1.00

Tables:   1

The End!