Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01008187.1 Kokia drynarioides strain JFW-HI SEQ_122846, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 9799
ACGTcount: A:0.32, C:0.19, G:0.17, T:0.32


Found at i:6732 original size:21 final size:21

Alignment explanation


    Indices: 6699--6738  Score: 53
    Period size: 21  Copynumber: 1.9  Consensus size: 21

       6689 TTCCTCCTTC

                *         *      
       6699 GCTTGCTCATCTACTTGATTG
          1 GCTTCCTCATCTACATGATTG

                    *          
       6720 GCTTCCTCTTCTACATGAT
          1 GCTTCCTCATCTACATGAT

       6739 GTTCATCCTC


Statistics
Matches: 16,  Mismatches: 3, Indels: 0
        0.84            0.16        0.00

Matches are distributed among these distances:
  21   16  1.00

ACGTcount: A:0.15, C:0.28, G:0.15, T:0.42


Consensus pattern (21 bp):   
GCTTCCTCATCTACATGATTG
Done.