Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008197.1 Kokia drynarioides strain JFW-HI SEQ_122859, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77504

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7703--7736
15
2.3
15
94
0
59
35
23
11
29
1.90
9422--9608
66
2.8
66
77
12
188
22
47
2
26
1.65
9427--9605
33
5.4
33
74
11
143
22
47
2
27
1.65
10418--10467
16
3.1
16
77
5
57
28
4
22
46
1.70
32541--32615
30
2.5
30
100
0
150
25
2
26
45
1.67
39604--39645
16
2.6
16
88
7
59
33
7
9
50
1.62
40028--40084
16
3.7
15
81
4
60
40
1
1
56
1.20
40057--40086
15
1.9
16
93
6
53
53
3
3
40
1.34
41593--41673
37
2.2
37
95
0
144
37
22
16
24
1.93
50125--50318
97
2.0
97
81
7
225
38
13
17
31
1.88
50559--50720
29
5.5
29
68
12
89
40
3
25
30
1.71
50642--50718
30
2.6
30
82
13
90
40
2
23
33
1.68
50556--50750
87
2.2
88
82
7
227
40
3
25
31
1.71
50642--50724
29
2.8
30
84
10
93
42
2
24
31
1.67
50559--50758
29
6.8
29
67
10
66
40
3
24
32
1.70
54441--54506
10
6.6
10
70
13
55
43
3
3
50
1.33
54442--54482
21
1.9
22
85
5
57
46
2
4
46
1.37
56324--56358
18
1.9
18
88
0
52
60
2
11
25
1.45
57037--57153
42
2.8
41
75
10
119
33
9
17
39
1.82
57584--57678
43
2.2
44
84
1
129
37
9
14
37
1.79
57793--57850
26
2.3
25
88
5
89
37
6
5
50
1.52
60113--60221
6
19.0
6
68
20
56
44
0
1
52
1.18
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60113--60222
23
4.8
24
70
18
74
45
0
1
51
1.18
60113--60221
17
6.4
17
78
9
114
44
0
1
52
1.18
60927--60955
3
9.7
3
100
0
58
65
0
0
34
0.93
62000--62255
59
4.3
58
85
2
314
34
28
3
33
1.76
61985--62255
29
9.2
29
81
8
298
33
28
4
33
1.77
62004--62296
118
2.5
117
82
9
339
34
27
5
32
1.79
62355--62416
28
2.2
28
91
0
97
29
32
11
27
1.91
63139--63168
15
2.1
15
93
6
53
33
6
10
50
1.62
66881--66939
22
2.7
22
87
7
77
72
1
10
15
1.18
66906--66935
15
1.9
16
93
6
53
70
0
13
16
1.18
67746--67788
19
2.3
19
84
8
52
58
4
0
37
1.19
67911--67955
21
2.1
21
92
8
74
73
0
6
20
1.05
68768--68810
19
2.3
19
84
8
52
58
4
0
37
1.19

Tables:   1

The End!