Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008223.1 Kokia drynarioides strain JFW-HI SEQ_122887, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69535

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3349--3406
31
1.9
30
86
10
82
43
1
3
51
1.28
7558--7593
19
1.9
19
94
5
65
61
2
0
36
1.11
11675--11714
17
2.5
15
84
15
53
62
0
0
37
0.95
16919--16963
19
2.4
19
81
7
56
37
0
4
57
1.19
18981--19024
21
2.1
21
86
0
61
45
13
11
29
1.79
22938--22970
6
5.5
6
100
0
66
33
0
0
66
0.92
22939--22991
12
4.1
13
88
9
56
37
0
0
62
0.96
25563--25588
13
2.0
13
100
0
52
84
0
15
0
0.62
25874--25913
20
2.0
20
100
0
80
30
10
20
40
1.85
27209--27241
16
2.1
16
94
5
59
18
12
0
69
1.18
32477--32515
20
2.0
20
85
10
53
35
10
7
46
1.67
36591--36655
18
3.4
18
80
6
67
43
35
15
6
1.72
36612--36667
27
2.1
27
86
6
78
42
33
14
8
1.77
39518--39594
39
1.9
40
92
5
129
33
22
10
33
1.88
52204--52304
44
2.3
45
76
6
109
42
21
5
29
1.77
55203--55248
18
2.6
17
78
15
58
32
0
4
63
1.14
55202--55259
17
3.3
18
67
18
50
32
0
3
63
1.11
56693--56727
18
1.9
18
88
0
52
74
2
14
8
1.17
60963--60989
2
13.5
2
100
0
54
51
0
0
48
1.00
60989--61025
2
18.5
2
88
0
56
51
5
43
0
1.24
63491--63526
2
18.0
2
100
0
72
50
0
50
0
1.00
65498--65528
3
10.3
3
100
0
62
64
0
0
35
0.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66988--67089
29
3.4
29
79
11
118
48
0
0
50
1.14
67048--67095
21
2.4
21
86
10
66
52
0
2
45
1.12

Tables:   1

The End!