Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NTFQ01008228.1 Kokia drynarioides strain JFW-HI SEQ_122892, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 49836
ACGTcount: A:0.34, C:0.17, G:0.15, T:0.34
Found at i:8532 original size:23 final size:23
Alignment explanation
Indices: 8500--8556 Score: 71
Period size: 23 Copynumber: 2.4 Consensus size: 23
8490 ATAGTAATTG
8500 AATTTCGAGTTAATT-GAATCAAAT
1 AATTT-GAGTTAATTCGAAT-AAAT
* *
8524 TATTTGAGTCAATTCGAATAAAT
1 AATTTGAGTTAATTCGAATAAAT
8547 AATTTGAGTT
1 AATTTGAGTT
8557 TTAAGTTGAA
Statistics
Matches: 28, Mismatches: 4, Indels: 3
0.80 0.11 0.09
Matches are distributed among these distances:
23 20 0.71
24 8 0.29
ACGTcount: A:0.39, C:0.07, G:0.14, T:0.40
Consensus pattern (23 bp):
AATTTGAGTTAATTCGAATAAAT
Found at i:8711 original size:19 final size:19
Alignment explanation
Indices: 8701--8737 Score: 67
Period size: 19 Copynumber: 2.0 Consensus size: 19
8691 AATAATTTTT
8701 AAAATTCAAAATATTTATA
1 AAAATTCAAAATATTTATA
8720 AAAATTCAAAAT-TTTATA
1 AAAATTCAAAATATTTATA
8738 TTTTTTTAAA
Statistics
Matches: 18, Mismatches: 0, Indels: 1
0.95 0.00 0.05
Matches are distributed among these distances:
18 6 0.33
19 12 0.67
ACGTcount: A:0.57, C:0.05, G:0.00, T:0.38
Consensus pattern (19 bp):
AAAATTCAAAATATTTATA
Found at i:8721 original size:18 final size:18
Alignment explanation
Indices: 8689--8737 Score: 64
Period size: 19 Copynumber: 2.7 Consensus size: 18
8679 AAAAATAATA
*
8689 AAAATAATTTTTAAAATTC
1 AAAAT-ATTTATAAAATTC
8708 AAAATATTTATAAAAATTC
1 AAAATATTTAT-AAAATTC
8727 AAAAT-TTTATA
1 AAAATATTTATA
8738 TTTTTTTAAA
Statistics
Matches: 28, Mismatches: 1, Indels: 4
0.85 0.03 0.12
Matches are distributed among these distances:
17 1 0.04
18 10 0.36
19 17 0.61
ACGTcount: A:0.55, C:0.04, G:0.00, T:0.41
Consensus pattern (18 bp):
AAAATATTTATAAAATTC
Found at i:16263 original size:15 final size:15
Alignment explanation
Indices: 16226--16266 Score: 52
Period size: 15 Copynumber: 2.9 Consensus size: 15
16216 TTTTTCTTTA
16226 TTTCACAATTTGAAGC
1 TTTCACAATTT-AAGC
16242 --T-ACAATTTAAGC
1 TTTCACAATTTAAGC
16254 TTTCACAATTTAA
1 TTTCACAATTTAA
16267 AACCACAACT
Statistics
Matches: 22, Mismatches: 0, Indels: 7
0.76 0.00 0.24
Matches are distributed among these distances:
12 4 0.18
13 7 0.32
14 2 0.09
15 9 0.41
ACGTcount: A:0.37, C:0.17, G:0.07, T:0.39
Consensus pattern (15 bp):
TTTCACAATTTAAGC
Found at i:16852 original size:85 final size:82
Alignment explanation
Indices: 16593--16875 Score: 211
Period size: 85 Copynumber: 3.4 Consensus size: 82
16583 TTATTATTAT
** * * * *
16593 AAAATCCAAATATAGAATTTAATATGTTAATCGGCGGGAATAAATCCCGAAACAAATTTAGTCAA
1 AAAATCCAAATATAGAA-AAAATCTGTTAA-CGGTGGGAATAAATCCTGAAACAAATTTATTCAA
*
16658 CTTAGTCTTGTTTTGGAAAC
64 CTTATTC-TGTTTTGGAAAC
* * * *
16678 AAAAT-CAAA-CTAGAATAAAATCTGTTAAACGATGAGAAAAAAAAAT-CTCGAAACAAATTTAT
1 AAAATCCAAATATAGAA-AAAATCTGTT-AACGGTG-G--GAATAAATCCT-GAAACAAATTTAT
* * *
16740 T-TACTTATT-TATTATTAGGAACC
60 TCAACTTATTCTGTT-TT-GGAAAC
* *
16763 AAAATCCAAATATAGAAACAAATCTATTGAACGGTGGGAATAAATCCTGAAACAGATTTATTCAA
1 AAAATCCAAATATAGAAA-AAATCTGTT-AACGGTGGGAATAAATCCTGAAACAAATTTATTCAA
*
16828 CTTATTCTCGTTTTGGAAAT
64 CTTATTCT-GTTTTGGAAAC
* *
16848 AAAAT-CAAA-ACAGATTAAAATCTGTTAA
1 AAAATCCAAATATAGA-AAAAATCTGTTAA
16876 ACAGCTGGAA
Statistics
Matches: 155, Mismatches: 28, Indels: 33
0.72 0.13 0.15
Matches are distributed among these distances:
82 2 0.01
83 31 0.20
84 33 0.21
85 40 0.26
86 28 0.18
87 21 0.14
ACGTcount: A:0.45, C:0.13, G:0.12, T:0.30
Consensus pattern (82 bp):
AAAATCCAAATATAGAAAAAATCTGTTAACGGTGGGAATAAATCCTGAAACAAATTTATTCAACT
TATTCTGTTTTGGAAAC
Found at i:16889 original size:84 final size:81
Alignment explanation
Indices: 16631--16892 Score: 217
Period size: 84 Copynumber: 3.1 Consensus size: 81
16621 AATCGGCGGG
* * *
16631 AATAAATCCCGAAACAAATTTAGTCAACTTAGTCTTGTTTTGGAAACAAAATC-AAACTAGAATA
1 AATAAATCCTGAAACAAATTTATTCAACTTATTC-TGTTTTGGAAACAAAATCAAAAC-AG-ATA
16695 AAATCTGTTAAACGATGAGAAA
63 AAATCTGTTAAACGATG-G--A
* * * * *
16717 AAAAAAT-CTCGAAACAAATTTATT-TACTTATT-TATTATTAGGAACCAAAATCCAAATATAGA
1 AATAAATCCT-GAAACAAATTTATTCAACTTATTCTGTT-TT-GGAAACAAAAT-CAAA-ACAGA
* * * * *
16779 AACAAATCTATTGAACGGTGGG
61 TA-AAATCTGTTAAACGATGGA
* *
16801 AATAAATCCTGAAACAGATTTATTCAACTTATTCTCGTTTTGGAAATAAAATCAAAACAGATTAA
1 AATAAATCCTGAAACAAATTTATTCAACTTATTCT-GTTTTGGAAACAAAATCAAAACAGA-TAA
*
16866 AATCTGTTAAACAGCTGGA
64 AATCTGTTAAAC-GATGGA
16885 AATAAATC
1 AATAAATC
16893 TTAAAATAGA
Statistics
Matches: 138, Mismatches: 25, Indels: 28
0.72 0.13 0.15
Matches are distributed among these distances:
83 18 0.13
84 38 0.28
85 35 0.25
86 26 0.19
87 20 0.14
88 1 0.01
ACGTcount: A:0.45, C:0.14, G:0.12, T:0.29
Consensus pattern (81 bp):
AATAAATCCTGAAACAAATTTATTCAACTTATTCTGTTTTGGAAACAAAATCAAAACAGATAAAA
TCTGTTAAACGATGGA
Found at i:17131 original size:50 final size:53
Alignment explanation
Indices: 17077--17185 Score: 136
Period size: 50 Copynumber: 2.1 Consensus size: 53
17067 ACAAGATCTC
17077 AACAAAAT-AATATAAACAAATATTTATATTTATAT-AAAACATCAAATTT-A
1 AACAAAATCAATATAAACAAATATTTATATTTATATAAAAACATCAAATTTGA
* * * * *
17127 AAC-AAATCACTTTAAATAAATATTTATATTTATTTAAAAACATCATATTTGA
1 AACAAAATCAATATAAACAAATATTTATATTTATATAAAAACATCAAATTTGA
*
17179 AAAAAAA
1 AACAAAA
17186 CCAAATTATT
Statistics
Matches: 49, Mismatches: 6, Indels: 5
0.82 0.10 0.08
Matches are distributed among these distances:
49 4 0.08
50 26 0.53
51 13 0.27
52 3 0.06
53 3 0.06
ACGTcount: A:0.56, C:0.08, G:0.01, T:0.35
Consensus pattern (53 bp):
AACAAAATCAATATAAACAAATATTTATATTTATATAAAAACATCAAATTTGA
Found at i:21941 original size:9 final size:9
Alignment explanation
Indices: 21927--21952 Score: 52
Period size: 9 Copynumber: 2.9 Consensus size: 9
21917 CAAGATTTGG
21927 TTTCTTGAT
1 TTTCTTGAT
21936 TTTCTTGAT
1 TTTCTTGAT
21945 TTTCTTGA
1 TTTCTTGA
21953 AAACAAGAAA
Statistics
Matches: 17, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
9 17 1.00
ACGTcount: A:0.12, C:0.12, G:0.12, T:0.65
Consensus pattern (9 bp):
TTTCTTGAT
Found at i:26968 original size:85 final size:83
Alignment explanation
Indices: 26717--26984 Score: 204
Period size: 85 Copynumber: 3.2 Consensus size: 83
26707 TTATAATTAT
** * * *
26717 AAAATCCAAATATAGAATTTAATATGTTAATTGGCGAGAATAAATCTCGAAACTGATTTAGTCAA
1 AAAATCCAAATATAGAATAAAATCTGTTAA-TGGCG-GAATAAATCTCGAAACAGATTTATTCAA
*
26782 CTTATTCTCGTTTTGGAAAC
64 CTTATTCTCATTTTGGAAAC
* * * * * * * * *
26802 -AAATTCAAA-CTGGATTAAAATCTGTTAAACGACGGGAAAAAAAATCCCG-AACTAAATTTATT
1 AAAATCCAAATATAGAATAAAATCTGTT-AATGGC-GG--AATAAATCTCGAAAC-AGATTTATT
* * * *
26864 -TACTTAATTATTA-TTTGGAACC
61 CAACTT-ATTCTCATTTTGGAAAC
* *
26886 AAAATCCAAATATAGAATGAAATCTGTTGAATGGCAGGAATAAATCTTGAAACAGATTTATTCAA
1 AAAATCCAAATATAGAATAAAATCTGTT-AATGGC-GGAATAAATCTCGAAACAGATTTATTCAA
*
26951 CTTATTCTCATTTTGGAAAT
64 CTTATTCTCATTTTGGAAAC
*
26971 AAAATCAAAATATA
1 AAAATCCAAATATA
26985 TTAAAATATG
Statistics
Matches: 134, Mismatches: 38, Indels: 22
0.69 0.20 0.11
Matches are distributed among these distances:
83 14 0.10
84 47 0.35
85 54 0.40
86 19 0.14
ACGTcount: A:0.43, C:0.13, G:0.13, T:0.32
Consensus pattern (83 bp):
AAAATCCAAATATAGAATAAAATCTGTTAATGGCGGAATAAATCTCGAAACAGATTTATTCAACT
TATTCTCATTTTGGAAAC
Found at i:31628 original size:38 final size:37
Alignment explanation
Indices: 31533--31639 Score: 124
Period size: 38 Copynumber: 2.8 Consensus size: 37
31523 TATAGTATAT
** *
31533 TGCTCTTATGAGCCAGTATCACTATTACGAGCCAAAAA
1 TGCTC-TATGAGCCAGTATTGCTCTTACGAGCCAAAAA
* **
31571 TGCTCTTTCGAGCCAGTATTGCTCTTACGAGCCAGTAA
1 TGCTCTAT-GAGCCAGTATTGCTCTTACGAGCCAAAAA
*
31609 TGCTCATATGGGCCAGTATTGCTCTTACGAG
1 TGCTC-TATGAGCCAGTATTGCTCTTACGAG
31640 TTAGTATTTA
Statistics
Matches: 59, Mismatches: 8, Indels: 4
0.83 0.11 0.06
Matches are distributed among these distances:
37 2 0.03
38 55 0.93
39 2 0.03
ACGTcount: A:0.25, C:0.24, G:0.21, T:0.30
Consensus pattern (37 bp):
TGCTCTATGAGCCAGTATTGCTCTTACGAGCCAAAAA
Found at i:31647 original size:19 final size:19
Alignment explanation
Indices: 31530--31639 Score: 112
Period size: 19 Copynumber: 5.8 Consensus size: 19
31520 CAGTATAGTA
*
31530 TATTGCTCTTATGAGCCAG
1 TATTGCTCTTACGAGCCAG
** * *
31549 TATCACTATTACGAGCCAA
1 TATTGCTCTTACGAGCCAG
* * *
31568 AAATGCTCTTTCGAGCCAG
1 TATTGCTCTTACGAGCCAG
31587 TATTGCTCTTACGAGCCAG
1 TATTGCTCTTACGAGCCAG
* * * *
31606 TAATGCTCATATGGGCCAG
1 TATTGCTCTTACGAGCCAG
31625 TATTGCTCTTACGAG
1 TATTGCTCTTACGAG
31640 TTAGTATTTA
Statistics
Matches: 68, Mismatches: 23, Indels: 0
0.75 0.25 0.00
Matches are distributed among these distances:
19 68 1.00
ACGTcount: A:0.25, C:0.24, G:0.20, T:0.31
Consensus pattern (19 bp):
TATTGCTCTTACGAGCCAG
Found at i:35352 original size:52 final size:52
Alignment explanation
Indices: 35238--35354 Score: 130
Period size: 52 Copynumber: 2.3 Consensus size: 52
35228 ATTAAATACA
* *
35238 AGATCTCAACAAAATAATATAAAGAAATATTTATATTTATATAAAAACATCC
1 AGATCTCAAAAAAATAATATAAAGAAATATTTATATTGATATAAAAACATCC
* * * * * * *
35290 A-ATTTTAAAAAAATCACTTTAAATAAATATTTATATTGATTTAAAAACAT-T
1 AGATCTCAAAAAAAT-AATATAAAGAAATATTTATATTGATATAAAAACATCC
35341 AGATCTCAAAAAAA
1 AGATCTCAAAAAAA
35355 ATTATTAAAC
Statistics
Matches: 52, Mismatches: 11, Indels: 4
0.78 0.16 0.06
Matches are distributed among these distances:
51 11 0.21
52 41 0.79
ACGTcount: A:0.54, C:0.09, G:0.03, T:0.33
Consensus pattern (52 bp):
AGATCTCAAAAAAATAATATAAAGAAATATTTATATTGATATAAAAACATCC
Found at i:35807 original size:31 final size:33
Alignment explanation
Indices: 35769--35830 Score: 92
Period size: 33 Copynumber: 1.9 Consensus size: 33
35759 ACCTTTAAAT
*
35769 CAATTTAATAG-AACCAA-ATCAAATTGAGAAA
1 CAATTTAATAGAAAACAATATCAAATTGAGAAA
*
35800 CAATTTAATTGAAAACAATATCAAATTGAGA
1 CAATTTAATAGAAAACAATATCAAATTGAGA
35831 TATTTTGCCC
Statistics
Matches: 27, Mismatches: 2, Indels: 2
0.87 0.06 0.06
Matches are distributed among these distances:
31 10 0.37
32 5 0.19
33 12 0.44
ACGTcount: A:0.53, C:0.11, G:0.10, T:0.26
Consensus pattern (33 bp):
CAATTTAATAGAAAACAATATCAAATTGAGAAA
Found at i:35828 original size:17 final size:18
Alignment explanation
Indices: 35786--35830 Score: 60
Period size: 15 Copynumber: 2.7 Consensus size: 18
35776 ATAGAACCAA
35786 ATCAAATTGAGAAACAAT
1 ATCAAATTGAGAAACAAT
*
35804 -T-TAATTGA-AAACAAT
1 ATCAAATTGAGAAACAAT
35819 ATCAAATTGAGA
1 ATCAAATTGAGA
35831 TATTTTGCCC
Statistics
Matches: 22, Mismatches: 2, Indels: 6
0.73 0.07 0.20
Matches are distributed among these distances:
15 7 0.32
16 7 0.32
17 7 0.32
18 1 0.05
ACGTcount: A:0.53, C:0.09, G:0.11, T:0.27
Consensus pattern (18 bp):
ATCAAATTGAGAAACAAT
Found at i:37116 original size:28 final size:28
Alignment explanation
Indices: 37067--37157 Score: 119
Period size: 30 Copynumber: 3.1 Consensus size: 28
37057 TTACGTTAGC
*
37067 AAGACACCCTCGCATTTTCAAGTGGTTGT
1 AAGACACCC-CACATTTTCAAGTGGTTGT
*
37096 AAGACACCCCACATTTCCAAGTGGTTGT
1 AAGACACCCCACATTTTCAAGTGGTTGT
* *
37124 AGGACACACCCCACATTTTCAAGTGATTGT
1 A--AGACACCCCACATTTTCAAGTGGTTGT
37154 AAGA
1 AAGA
37158 TTATTTTTTA
Statistics
Matches: 54, Mismatches: 6, Indels: 5
0.83 0.09 0.08
Matches are distributed among these distances:
28 20 0.37
29 9 0.17
30 25 0.46
ACGTcount: A:0.30, C:0.25, G:0.19, T:0.26
Consensus pattern (28 bp):
AAGACACCCCACATTTTCAAGTGGTTGT
Found at i:41248 original size:84 final size:82
Alignment explanation
Indices: 40932--41257 Score: 223
Period size: 83 Copynumber: 3.9 Consensus size: 82
40922 TTGGAATAGA
* * * * * * * **
40932 ATTTAATTAATTCATTATTTGGAAACTAAATCAAACTTA-AATCAAATCTATTAATCGACGGGAA
1 ATTTAATTAATT-ATTATTTGGAACCAAAATCAAA-ATAGAATAAAATATGTTAAACGGTGGGAA
* *
40996 TAAATCCCAAAACAGATTT
64 TAAATCCAAAAACAAATTT
** * * * * * * * **
41015 AGTCGACTT-ATTCTTGTTTTGAAAACAAAATCAAACTGGAATAAAATATGTTAAAAAGTGGGAA
1 A-TTTAATTAATTATT-ATTTGGAACCAAAATCAAAATAGAATAAAATATGTTAAACGGTGGGAA
41079 -AAATCCAAAAACAAATTT
64 TAAATCCAAAAACAAATTT
* * * *
41097 ATTTACTTAATTATTATTTGGAACCAAAATCCAAATATAGAATTAAATCTGTTGAACGGTGGGAA
1 ATTTAATTAATTATTATTTGGAACCAAAAT-CAAA-ATAGAATAAAATATGTTAAACGGTGGGAA
* *
41162 TAAATCCTAAAACATATTT
64 TAAATCCAAAAACAAATTT
* * *
41181 ATTTAATCT-ATTCTCCT-TTTGGGAA-TAAAATCAAAATAGAATAAAATTTGTTAAACGGTGGG
1 ATTTAAT-TAATTAT--TATTT-GGAACCAAAATCAAAATAGAATAAAATATGTTAAACGGTGGG
41243 AAATAAATCTCAAAA
62 -AATAAATC-CAAAA
41258 TAAATTATTT
Statistics
Matches: 189, Mismatches: 41, Indels: 24
0.74 0.16 0.09
Matches are distributed among these distances:
81 17 0.09
82 29 0.15
83 83 0.44
84 42 0.22
85 13 0.07
86 5 0.03
ACGTcount: A:0.44, C:0.12, G:0.12, T:0.32
Consensus pattern (82 bp):
ATTTAATTAATTATTATTTGGAACCAAAATCAAAATAGAATAAAATATGTTAAACGGTGGGAATA
AATCCAAAAACAAATTT
Found at i:41557 original size:51 final size:52
Alignment explanation
Indices: 41440--41557 Score: 123
Period size: 51 Copynumber: 2.3 Consensus size: 52
41430 CAATATATTG
* *
41440 GAAAAATAATATAAACAAATATTTATATTTATATAAAAACATCAGATTTCAACA
1 GAAAAA-AA-ATAAATAAATATTTATATTTATATAAAAACATCAAATTTCAACA
** *** * *
41494 -AATCACTTTAAATAAATATTTATATTTATTTAAAAACATCAAATTTGAA-A
1 GAAAAAAAATAAATAAATATTTATATTTATATAAAAACATCAAATTTCAACA
41544 GAAAAAAAATAAAT
1 GAAAAAAAATAAAT
41558 TATTAAACAA
Statistics
Matches: 49, Mismatches: 14, Indels: 5
0.72 0.21 0.07
Matches are distributed among these distances:
50 1 0.02
51 45 0.92
53 3 0.06
ACGTcount: A:0.56, C:0.08, G:0.03, T:0.33
Consensus pattern (52 bp):
GAAAAAAAATAAATAAATATTTATATTTATATAAAAACATCAAATTTCAACA
Found at i:42883 original size:84 final size:84
Alignment explanation
Indices: 42675--42941 Score: 240
Period size: 84 Copynumber: 3.2 Consensus size: 84
42665 TAATCAGGGC
* * * * * *
42675 AATAAATCCCAAAACAGATTTAGTCATCTTATTCTTATTTTAGAAACAAAATCAAAT-TTGAATA
1 AATAAATCCCAAAACAGATTTATTAAACTTATTC-TAATTTGGAAACAAAATCAAATATAGAATA
** * *
42739 AAATTTGTTAAATAGCGAGA
65 AAATTTGTTAAACGGCAACA
* * * * * *
42759 AA-AAATCCCGAAACATATTTATTTAA-TTAATTATTATTTGGAACCAAAATCCAAATATAGAA-
1 AATAAATCCCAAAACAGATTTATTAAACTT-ATTCTAATTTGGAAACAAAAT-CAAATATAGAAT
*
42821 ATAAATTTGTTGAACGGC-ACA
64 A-AAATTTGTTAAACGGCAACA
** *
42842 AATAAATCCCAAAACAGATTTATTAAACTTATTCTCGTTTGGGAAATAAAATCAAA-ATAGAATA
1 AATAAATCCCAAAACAGATTTATTAAACTTATTCTAATTT-GGAAACAAAATCAAATATAGAATA
* *
42906 AAATCTGTTAAACGGCAATA
65 AAATTTGTTAAACGGCAACA
*
42926 AATAAATCCCGAAACA
1 AATAAATCCCAAAACA
42942 AATTATTTTT
Statistics
Matches: 147, Mismatches: 27, Indels: 18
0.77 0.14 0.09
Matches are distributed among these distances:
82 15 0.10
83 52 0.35
84 69 0.47
85 11 0.07
ACGTcount: A:0.47, C:0.13, G:0.10, T:0.30
Consensus pattern (84 bp):
AATAAATCCCAAAACAGATTTATTAAACTTATTCTAATTTGGAAACAAAATCAAATATAGAATAA
AATTTGTTAAACGGCAACA
Found at i:44483 original size:94 final size:94
Alignment explanation
Indices: 44317--44500 Score: 244
Period size: 94 Copynumber: 2.0 Consensus size: 94
44307 TATTTTGTCG
** * *
44317 AATTTTTTCTTAAGAATGTATTAGCCCTTTTGACGCGAAGTGAAATAACAACTCAAGCACCCCGT
1 AATTTTTTCTTAAGAATGTATTAGCCCTTTTGACGCGAAACGAAATAACAACCCAAGCACCCCAT
** *
44382 CTTGGTTACTCAACTCAACACACTCCCAA
66 CCCGGTTACTCAACCCAACACACTCCCAA
* * *
44411 AATTTTTTAC-TAAGAATGTATTGGCCCTTTTGACGCGAAACGGAATGACAACCCAAGCACCCCA
1 AATTTTTT-CTTAAGAATGTATTAGCCCTTTTGACGCGAAACGAAATAACAACCCAAGCACCCCA
* *
44475 TCCCGGTTATTCAGCCCAACACACTC
65 TCCCGGTTACTCAACCCAACACACTC
44501 TTATTTTATT
Statistics
Matches: 77, Mismatches: 12, Indels: 2
0.85 0.13 0.02
Matches are distributed among these distances:
94 76 0.99
95 1 0.01
ACGTcount: A:0.31, C:0.28, G:0.14, T:0.27
Consensus pattern (94 bp):
AATTTTTTCTTAAGAATGTATTAGCCCTTTTGACGCGAAACGAAATAACAACCCAAGCACCCCAT
CCCGGTTACTCAACCCAACACACTCCCAA
Done.