Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01008258.1 Kokia drynarioides strain JFW-HI SEQ_122923, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 10315
ACGTcount: A:0.35, C:0.15, G:0.16, T:0.34


Found at i:2716 original size:16 final size:16

Alignment explanation


    Indices: 2695--2728  Score: 68
    Period size: 16  Copynumber: 2.1  Consensus size: 16

       2685 AGATTGCAAT

                            
       2695 CAAAACTCATGAGGGG
          1 CAAAACTCATGAGGGG

                            
       2711 CAAAACTCATGAGGGG
          1 CAAAACTCATGAGGGG

              
       2727 CA
          1 CA

       2729 CTATGAGTTC


Statistics
Matches: 18,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  16   18  1.00

ACGTcount: A:0.38, C:0.21, G:0.29, T:0.12


Consensus pattern (16 bp):   
CAAAACTCATGAGGGG
Done.