Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008264.1 Kokia drynarioides strain JFW-HI SEQ_122929, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57287

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--28
2
14.0
2
100
0
56
50
0
0
50
1.00
2655--2684
3
10.0
3
100
0
60
66
0
33
0
0.92
3918--3970
22
2.4
22
87
6
72
24
24
35
15
1.94
6384--6430
20
2.4
19
76
16
51
46
17
4
31
1.67
10563--10659
15
6.3
15
71
16
74
72
2
5
20
1.15
10563--10672
9
11.7
9
68
20
57
71
2
4
20
1.16
10563--10659
31
3.2
30
76
15
92
72
2
5
20
1.15
10566--10672
31
3.4
31
72
18
87
71
2
4
21
1.18
17682--17727
18
2.6
17
83
10
56
39
0
6
54
1.26
23735--23806
33
2.2
33
82
7
85
51
12
4
31
1.59
29696--29726
16
1.9
16
100
0
62
32
32
3
32
1.74
31604--31742
65
2.1
66
97
2
271
43
23
4
28
1.72
32955--33112
80
2.0
80
86
5
221
31
22
18
27
1.97
37942--37971
14
2.1
15
93
6
53
26
0
0
73
0.84
38453--38719
101
2.6
101
80
3
270
26
19
17
35
1.94
38556--38697
51
2.8
49
71
9
133
26
18
19
36
1.94
38747--38926
51
3.5
51
69
19
160
26
22
16
33
1.95
38765--38969
101
2.0
101
90
1
322
25
19
18
36
1.95
39250--39461
49
4.3
49
84
0
244
20
24
16
38
1.93
39889--40104
112
1.9
112
88
1
326
38
12
17
31
1.88
40416--40498
19
4.4
19
72
15
66
1
16
1
80
0.84
40418--40496
9
7.9
10
76
11
65
1
15
1
82
0.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43473--43758
51
5.5
51
90
3
380
27
22
16
33
1.95
43473--43758
153
1.9
155
87
3
425
27
22
16
33
1.95
47342--47387
24
1.9
24
82
8
58
67
0
6
26
1.15
49351--49530
10
18.8
9
67
21
57
61
2
4
31
1.28
49362--49520
19
8.1
18
70
17
88
62
2
3
30
1.26
49368--49472
11
10.3
11
71
15
57
64
2
2
29
1.22
49382--49520
30
4.8
28
77
10
111
62
2
4
30
1.29
49692--49776
28
2.9
28
79
10
73
35
4
2
57
1.32
49702--49749
19
2.5
20
83
6
64
37
6
0
56
1.25
49714--49769
20
2.9
18
82
12
51
30
7
1
60
1.33
49762--49832
31
2.3
31
80
11
83
39
0
1
59
1.06
55562--55596
17
2.1
17
94
0
61
60
0
8
31
1.27
56127--56182
15
3.7
15
74
9
60
32
19
17
30
1.95
56659--56805
73
2.0
73
98
0
285
40
7
21
29
1.81

Tables:   1

The End!