Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008272.1 Kokia drynarioides strain JFW-HI SEQ_122937, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78331

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
271--301
6
5.0
6
96
4
53
19
0
64
16
1.29
4786--4826
21
2.0
21
95
0
73
19
17
24
39
1.92
11906--11936
10
2.9
11
90
9
55
6
0
19
74
1.03
12067--12138
38
1.9
38
86
10
105
27
0
8
63
1.23
14231--14296
34
1.9
34
84
6
89
28
4
3
63
1.29
14688--14730
18
2.5
17
76
3
50
34
0
2
62
1.08
14820--14857
14
2.9
14
81
18
55
52
7
0
39
1.31
17637--17674
18
2.1
19
85
9
53
47
7
0
44
1.32
18516--18559
20
2.2
20
83
4
52
56
0
0
43
0.99
18865--18934
29
2.2
31
82
12
81
42
5
1
50
1.35
19349--19408
16
3.3
18
77
13
61
61
8
0
30
1.25
24179--24236
26
2.2
26
87
6
82
63
0
8
27
1.23
24198--24300
19
5.7
18
69
17
61
61
0
3
33
1.21
24200--24314
19
6.2
19
68
20
57
60
1
3
33
1.24
24875--24943
20
3.7
18
81
7
61
27
5
4
62
1.37
37263--37419
78
2.0
79
94
1
280
38
8
12
40
1.73
38463--38580
56
2.1
58
84
7
152
31
15
4
49
1.64
47326--47413
44
2.0
44
95
0
158
34
10
27
28
1.89
65850--65879
15
2.0
15
93
0
51
76
0
23
0
0.78
72659--73336
60
11.3
59
78
9
533
29
18
14
37
1.90
72689--73336
120
5.4
120
81
4
610
29
18
14
37
1.90
74204--74251
19
2.6
19
76
3
53
58
2
4
35
1.29
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
76367--76990
60
10.4
59
79
8
505
40
15
16
28
1.89
76370--76929
122
4.6
120
80
8
527
40
14
16
28
1.88
76375--76932
182
3.1
180
79
9
521
40
14
16
28
1.88
76375--76990
242
2.6
242
80
10
642
40
15
16
28
1.88
76852--77098
58
4.3
55
73
14
169
43
18
16
22
1.88

Tables:   1

The End!