Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008288.1 Kokia drynarioides strain JFW-HI SEQ_122953, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  103805

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2276--2312
14
2.6
14
91
8
58
56
2
10
29
1.47
22432--22642
106
2.0
106
100
0
422
39
21
9
28
1.86
24412--24443
15
2.1
15
94
0
55
84
15
0
0
0.63
24871--25708
235
3.7
235
86
5
1053
36
20
13
28
1.91
25323--25926
218
2.8
211
85
5
762
38
17
13
30
1.89
28650--28676
14
1.9
14
100
0
54
14
0
14
70
1.17
29148--29232
30
2.8
31
82
10
97
41
0
5
52
1.25
29150--29232
31
2.8
32
82
12
97
40
0
6
53
1.26
31321--31350
3
9.7
3
92
7
51
30
0
36
33
1.58
33856--33899
22
2.0
23
90
4
72
40
4
4
50
1.43
37316--37383
35
1.9
35
84
0
91
16
20
13
50
1.78
42720--42770
27
1.9
26
84
4
66
52
13
0
33
1.41
48070--48581
228
2.2
230
82
6
631
45
16
8
30
1.76
48400--49040
210
2.9
210
80
10
600
42
15
9
31
1.79
48613--49113
233
2.2
233
90
3
773
41
17
9
31
1.82
50037--50103
29
2.3
30
79
7
75
34
8
17
38
1.82
50839--50864
13
2.0
13
100
0
52
84
7
0
7
0.77
63686--63756
11
6.1
11
74
18
63
63
2
1
32
1.18
70257--70316
29
2.0
30
87
9
88
70
0
3
26
1.03
73814--73862
16
2.9
16
85
8
62
63
4
0
32
1.13
73842--73881
21
1.9
21
85
10
55
60
10
0
30
1.30
77435--77488
20
2.9
18
81
10
63
59
5
3
31
1.38
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
77450--77489
20
2.0
20
95
0
71
62
10
2
25
1.39
78068--78103
2
18.0
2
100
0
72
50
0
0
50
1.00
80009--80097
31
3.0
30
75
8
83
39
14
12
33
1.84
88571--88627
24
2.4
24
90
0
96
29
7
29
33
1.84
95348--95789
223
2.0
223
90
1
699
36
15
16
31
1.90
98142--98189
21
2.3
22
79
17
57
52
8
0
39
1.32
100450--100548
31
3.1
30
75
16
92
43
6
12
38
1.67

Tables:   1

The End!