Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008298.1 Kokia drynarioides strain JFW-HI SEQ_122963, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50119

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9540--9613
30
2.5
29
80
10
78
55
6
0
37
1.27
11072--11108
2
18.5
2
100
0
74
51
0
0
48
1.00
16123--16173
20
2.5
20
87
3
66
49
3
7
39
1.51
18688--18736
25
2.0
25
84
8
64
44
2
2
51
1.24
19113--19158
18
2.5
18
86
10
58
63
0
0
36
0.95
21248--21290
21
2.0
22
86
4
61
25
11
9
53
1.67
21555--21584
16
1.9
15
93
6
51
23
3
0
73
0.98
21903--21961
29
2.0
29
93
0
100
52
11
11
23
1.71
29976--30132
9
16.4
9
72
16
93
33
1
3
61
1.22
29975--30137
10
16.8
10
71
14
58
33
1
3
61
1.21
30013--30062
21
2.4
21
86
3
66
30
4
6
60
1.39
30013--30070
20
2.8
21
84
2
64
32
3
5
58
1.37
41512--41583
23
3.3
23
63
11
60
52
5
9
31
1.57
41502--41607
43
2.4
43
92
4
167
53
7
6
32
1.55
44414--44468
23
2.4
23
90
0
92
25
23
21
29
1.99
45238--45372
29
4.7
29
83
1
121
40
16
17
25
1.90
45308--45356
17
3.2
17
67
27
54
40
16
22
20
1.91
45312--45381
29
2.4
29
90
0
104
45
17
15
21
1.85
46008--46138
41
3.2
40
73
6
100
29
25
18
27
1.98
46008--46107
43
2.4
43
81
6
116
29
26
18
27
1.98
46114--46214
53
1.9
53
81
4
123
28
31
15
23
1.96
46211--46294
31
2.7
31
80
7
91
33
27
10
28
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46360--46402
21
2.0
21
95
0
77
27
20
18
32
1.96

Tables:   1

The End!