Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008311.1 Kokia drynarioides strain JFW-HI SEQ_122976, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57782

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3347--3523
90
2.0
90
92
2
293
27
37
5
30
1.78
8288--8315
14
2.0
14
100
0
56
42
0
7
50
1.30
8971--8996
5
5.2
5
100
0
52
19
0
0
80
0.71
12826--12866
11
3.9
11
81
6
50
53
0
0
46
1.00
12794--12888
30
3.1
32
79
7
108
48
1
0
50
1.07
12883--12934
18
3.1
18
73
21
67
17
36
0
46
1.48
12885--12937
17
3.2
17
75
20
67
15
33
0
50
1.44
13022--13218
98
2.0
99
91
1
324
22
31
8
37
1.84
13823--13865
22
2.0
22
90
4
70
51
0
0
48
1.00
15119--15155
6
6.2
6
100
0
74
16
35
32
16
1.91
27788--27848
21
3.0
21
83
11
65
63
6
3
26
1.34
27834--28055
9
23.6
9
68
19
107
59
3
3
33
1.30
27810--28055
10
24.7
10
66
20
72
60
3
3
32
1.30
27900--28055
20
8.1
19
72
18
83
60
3
2
33
1.26
27982--28055
29
2.6
28
77
10
78
62
2
2
32
1.23
31844--31883
14
3.1
13
82
10
55
67
5
0
27
1.11
45493--45561
34
2.0
34
100
0
138
20
26
14
39
1.91
47396--47763
183
2.0
185
95
1
668
39
15
16
28
1.89
54905--54947
22
1.9
23
85
4
61
48
4
2
44
1.36
54910--54979
31
2.3
31
84
0
95
41
4
4
50
1.42

Tables:   1

The End!