Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008358.1 Kokia drynarioides strain JFW-HI SEQ_123025, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53424

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4291--4322
2
16.0
2
100
0
64
50
0
0
50
1.00
4886--4910
6
4.2
6
100
0
50
16
0
32
52
1.44
11646--11788
2
71.5
2
76
2
135
43
4
5
46
1.46
11866--11926
4
15.2
4
85
0
50
47
11
1
39
1.50
11866--11930
22
3.0
22
88
0
94
46
10
3
40
1.54
11866--11926
18
3.4
18
95
0
104
47
11
1
39
1.50
11742--12003
142
1.8
142
93
0
452
44
6
16
32
1.74
12714--12782
34
2.0
34
100
0
138
31
5
17
44
1.72
22686--22758
34
2.1
34
92
0
119
53
0
16
30
1.43
23283--23317
16
2.2
16
90
5
54
40
5
0
54
1.24
23780--23814
12
2.9
12
100
0
70
57
25
0
17
1.40
24437--24472
16
2.3
16
90
4
56
55
2
2
38
1.29
25936--26028
6
16.2
6
71
20
74
43
2
1
53
1.19
25936--26028
17
5.4
17
85
2
132
43
2
1
53
1.19
25936--26028
11
8.1
12
73
20
74
43
2
1
53
1.19
26683--26797
3
37.3
3
80
5
104
54
4
1
39
1.30
27855--28199
29
11.8
29
68
16
151
31
24
4
38
1.76
27860--28204
59
5.9
56
80
8
307
31
24
4
38
1.77
27860--28190
117
2.8
116
80
8
368
31
25
4
38
1.77
39934--40311
49
7.7
49
74
5
282
39
21
25
14
1.91
39934--40255
147
2.2
147
84
2
405
39
22
25
13
1.89
39934--40314
147
2.6
147
81
2
363
39
21
25
14
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40735--40795
17
3.6
17
86
6
88
40
3
1
54
1.27
41053--41096
15
3.3
15
73
26
53
45
0
0
54
0.99
41067--41107
11
3.8
11
83
3
57
46
0
0
53
1.00
41947--41989
11
4.1
10
80
11
50
51
0
0
48
1.00
42943--43027
28
3.1
28
81
1
91
56
3
1
38
1.24
42968--43027
3
19.7
3
89
3
84
60
1
0
38
1.07
44219--44308
27
3.2
27
70
9
81
34
22
1
42
1.61
44118--44484
59
6.3
58
83
8
376
32
24
2
40
1.70
44111--44578
29
15.9
29
66
17
166
31
25
3
39
1.74
44230--44554
120
2.7
118
80
10
317
30
25
4
39
1.74
44532--44592
29
2.1
29
84
3
79
31
31
11
26
1.91
46568--46611
23
1.9
23
81
9
54
59
4
4
31
1.38
47228--47262
18
1.9
18
88
0
52
60
0
11
28
1.32
47641--47964
170
1.9
170
94
0
567
42
4
12
39
1.65
48338--48408
32
2.2
32
80
11
85
32
4
1
61
1.23
48356--48416
20
3.0
20
75
11
61
31
1
3
63
1.20
48440--48506
30
2.2
31
84
12
86
58
7
0
34
1.26
48500--48545
24
1.9
25
86
8
69
60
13
0
26
1.32
48554--48601
24
2.0
23
84
11
62
35
29
6
29
1.82
50247--50280
16
2.1
16
88
0
50
20
8
2
67
1.31
50257--50300
16
2.8
16
85
0
52
34
2
0
63
1.07

Tables:   1

The End!