Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008360.1 Kokia drynarioides strain JFW-HI SEQ_123027, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24189

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4672--4710
16
2.4
16
86
0
51
33
30
15
20
1.94
4699--4752
23
2.4
21
82
11
63
27
35
14
22
1.93
4801--4862
26
2.3
27
83
8
72
33
27
17
20
1.96
5012--5084
28
2.6
28
84
0
101
28
31
20
19
1.97
5009--5108
14
7.2
14
67
5
60
29
30
21
20
1.98
5009--5103
28
3.4
28
78
5
86
28
31
21
18
1.97
5091--5139
15
3.3
15
85
5
73
26
18
20
34
1.95
5066--5148
14
5.7
15
79
11
84
28
25
19
26
1.98
6397--6440
16
2.9
15
76
6
52
34
0
4
61
1.16
7630--7711
42
2.0
42
97
0
155
17
15
26
40
1.89
8184--8487
30
10.2
30
76
12
209
36
2
23
38
1.67
8176--8480
60
5.1
61
80
10
267
37
2
23
37
1.68
9478--9543
13
5.2
13
78
3
64
33
3
1
62
1.20
9483--9553
22
3.2
21
75
20
65
32
4
2
60
1.30
9478--9543
3
21.0
3
72
9
51
33
3
1
62
1.20
10121--10164
17
2.6
17
92
0
70
56
2
0
40
1.11
10671--10983
155
2.0
155
90
0
491
20
21
18
39
1.92
10951--11106
85
1.8
85
84
2
215
26
23
14
35
1.93
11005--11395
209
1.9
209
86
2
570
24
23
17
34
1.96
23339--23418
29
2.8
29
82
3
90
27
5
32
35
1.79
23357--23707
30
11.8
30
71
10
170
35
4
25
35
1.77
23424--23710
30
9.7
30
72
12
175
35
4
24
35
1.77
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23534--23610
32
2.5
30
82
4
91
32
1
25
40
1.64

Tables:   1

The End!