Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008541.1 Kokia drynarioides strain JFW-HI SEQ_123218, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  99072

Tables:   1   

This is table  1  of  1  ( 63 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2381--2483
51
2.0
51
94
0
179
36
7
21
33
1.82
2770--2848
28
2.8
28
76
7
79
37
20
3
37
1.71
3102--3216
22
5.2
22
77
7
90
47
20
0
31
1.51
3109--3216
44
2.5
43
78
4
119
48
20
0
31
1.50
3722--3769
23
2.1
23
88
7
71
25
20
16
37
1.93
6857--6978
39
3.1
39
75
2
93
33
17
21
27
1.95
8448--8491
21
2.1
21
87
8
63
29
11
27
31
1.91
15705--15773
9
7.6
9
74
9
59
71
4
4
20
1.21
15830--15906
8
8.6
9
77
16
63
70
1
2
25
1.08
15849--15910
17
3.9
16
78
17
58
72
1
1
24
1.02
20311--20435
20
6.2
20
74
5
85
37
18
28
15
1.91
21081--21124
23
2.0
23
86
4
63
34
15
6
43
1.74
24464--24508
16
2.9
15
76
3
54
64
2
2
31
1.18
24723--24809
46
2.0
44
88
6
131
54
6
16
22
1.66
26610--26705
45
2.1
45
92
0
156
25
11
19
43
1.84
33109--33178
8
8.5
8
76
19
56
62
1
0
35
1.04
33108--33194
17
5.2
17
75
15
67
64
1
1
33
1.09
33899--33977
11
6.9
12
73
11
67
2
2
29
65
1.18
33909--33970
22
2.7
23
85
2
81
3
3
25
67
1.20
33877--33947
34
2.2
34
87
7
103
4
2
25
67
1.22
33899--33977
23
3.5
23
78
3
88
2
2
29
65
1.18
34501--34571
8
8.8
8
73
21
51
61
1
0
36
1.05
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34501--34571
15
4.4
16
68
26
51
61
1
0
36
1.05
34501--34579
33
2.4
32
81
14
90
62
1
0
36
1.04
34509--34569
27
2.4
26
76
13
65
63
1
0
34
1.04
34974--35038
13
5.0
13
71
3
51
30
3
3
63
1.25
34964--35042
39
2.0
39
92
0
131
30
5
7
56
1.49
35283--35356
22
3.4
22
79
7
87
8
4
17
70
1.28
35378--35423
21
2.2
20
84
3
56
4
8
23
63
1.42
35400--35451
11
4.5
12
80
7
63
1
5
23
69
1.20
35402--35458
23
2.5
24
85
5
73
1
7
22
68
1.23
35983--36025
15
2.9
15
78
0
50
62
0
0
37
0.95
44465--44523
17
3.4
17
69
17
57
59
5
3
32
1.36
44568--44756
54
3.6
51
73
18
154
39
2
33
23
1.69
46076--46161
27
3.1
27
79
1
91
59
3
2
34
1.27
46082--46127
22
2.1
21
84
4
56
60
2
2
34
1.21
46067--46370
153
2.0
153
94
0
536
51
4
6
37
1.48
46233--46296
27
2.4
27
83
0
83
56
3
1
39
1.25
46244--46330
33
2.7
32
79
8
97
57
1
4
36
1.27
62462--62585
27
4.6
27
82
1
140
25
13
22
37
1.91
62466--62601
54
2.5
54
82
5
143
25
13
22
37
1.92
68449--68500
26
2.0
25
85
10
70
25
11
1
61
1.40
72743--72776
15
2.3
15
89
0
50
76
2
0
20
0.92
72801--72838
16
2.3
16
86
13
51
78
2
2
15
0.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72844--72877
13
2.5
14
85
4
52
76
5
0
17
0.98
72893--72934
15
2.8
15
82
10
50
73
4
2
19
1.12
73150--73206
22
2.5
23
80
2
62
47
8
7
36
1.62
73816--73929
50
2.3
51
78
6
126
22
14
20
42
1.89
73904--74598
49
14.2
50
75
8
497
20
17
16
45
1.85
82984--83027
21
2.1
21
83
8
54
68
11
4
15
1.36
82988--83049
26
2.4
26
81
5
63
64
9
4
20
1.42
84025--84065
16
2.5
16
88
4
55
65
0
4
29
1.13
84904--84964
27
2.3
27
94
0
104
19
19
26
34
1.96
86751--86783
2
16.5
2
93
0
57
45
0
0
54
0.99
87846--87904
30
2.0
30
83
6
75
45
1
8
44
1.44
89759--89801
17
2.6
17
78
14
54
23
0
4
72
1.04
89784--89862
33
2.7
27
72
20
68
26
1
7
64
1.28
91804--91839
18
2.0
18
100
0
72
27
11
22
38
1.88
93429--93468
20
2.0
20
85
0
53
37
10
0
52
1.35
97461--97580
59
2.0
59
98
0
231
40
5
6
46
1.54
98285--98316
16
1.9
17
93
6
57
53
0
0
46
1.00
98284--98327
16
2.5
17
82
17
54
56
2
0
40
1.11
99005--99054
24
2.1
23
85
3
64
50
0
0
50
1.00

Tables:   1

The End!