Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008552.1 Kokia drynarioides strain JFW-HI SEQ_123230, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45475

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4048--6328
462
4.9
461
84
2
2848
39
15
22
22
1.91
14302--14401
36
2.8
36
83
3
112
37
14
26
23
1.92
15064--15114
21
2.4
21
87
6
68
21
13
25
39
1.90
17478--17523
21
2.2
21
88
7
67
54
2
4
39
1.32
20255--20351
30
3.3
29
89
4
149
39
21
5
34
1.76
22073--22105
17
2.1
17
88
11
52
42
3
0
54
1.15
25787--25991
105
2.0
105
95
0
365
26
12
24
36
1.91
35513--35556
18
2.3
18
84
7
52
36
0
9
54
1.32
35511--35546
18
2.0
18
88
0
54
38
0
11
50
1.38
35604--35648
11
3.9
11
77
11
54
35
0
2
62
1.08
35739--35812
24
3.0
24
71
7
60
40
6
1
51
1.37
36396--36425
15
2.0
15
100
0
60
40
33
6
20
1.78
42343--42518
93
1.9
93
95
0
316
28
17
13
41
1.86
45025--45059
11
2.8
13
83
16
56
68
17
5
8
1.35
45293--45349
12
4.9
11
77
12
51
71
0
26
1
0.95
45304--45346
4
10.8
4
80
9
52
74
0
25
0
0.82
45304--45345
22
2.0
21
86
9
59
73
0
26
0
0.83

Tables:   1

The End!