Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01008559.1 Kokia drynarioides strain JFW-HI SEQ_123237, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 955

Length: 1593
ACGTcount: A:0.31, C:0.19, G:0.16, T:0.35


Found at i:1223 original size:13 final size:13

Alignment explanation


    Indices: 1205--1229  Score: 50
    Period size: 13  Copynumber: 1.9  Consensus size: 13

       1195 TTGTATTAGA

                         
       1205 TGGATTATTTCGG
          1 TGGATTATTTCGG

                        
       1218 TGGATTATTTCG
          1 TGGATTATTTCG

       1230 AGGAAAGAAA


Statistics
Matches: 12,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  13   12  1.00

ACGTcount: A:0.16, C:0.08, G:0.28, T:0.48


Consensus pattern (13 bp):   
TGGATTATTTCGG
Done.