Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008620.1 Kokia drynarioides strain JFW-HI SEQ_123299, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30879

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
401--762
29
12.4
30
75
12
201
37
26
4
31
1.77
396--722
29
11.2
29
77
11
226
36
27
4
31
1.78
4735--4778
23
1.9
23
81
9
54
45
9
9
36
1.68
5301--5350
2
26.0
2
80
8
59
42
0
0
58
0.98
6208--6233
2
13.0
2
100
0
52
50
0
0
50
1.00
6980--7035
15
4.0
14
80
19
64
7
7
67
17
1.37
6980--7035
21
2.7
21
77
0
67
7
7
67
17
1.37
6980--7032
27
2.0
27
84
0
70
7
5
67
18
1.35
6989--7039
15
3.4
15
88
0
75
5
9
66
17
1.40
8290--8366
20
3.8
20
66
19
61
51
1
3
42
1.28
15990--16016
11
2.5
11
100
0
54
92
0
0
7
0.38
23283--23322
18
2.2
17
86
8
53
62
2
2
32
1.22
24723--24770
25
2.0
24
91
4
78
56
0
2
41
1.11
25577--25632
26
2.2
26
93
0
94
58
3
17
19
1.53
25737--25761
3
8.3
3
100
0
50
36
0
0
64
0.94
28157--28195
17
2.4
18
80
20
50
71
0
0
28
0.86

Tables:   1

The End!