Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008635.1 Kokia drynarioides strain JFW-HI SEQ_123315, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  95934

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19--67
15
3.3
15
70
0
53
36
46
4
12
1.60
1--77
30
2.6
30
87
8
120
37
50
3
7
1.50
64--142
33
2.4
33
93
0
131
27
48
15
8
1.74
132--156
6
4.2
6
100
0
50
16
68
0
16
1.22
6492--6527
13
2.8
13
100
0
72
16
38
22
22
1.93
8443--8480
7
5.4
7
84
9
51
44
36
0
18
1.50
8443--8480
13
2.7
14
84
12
51
44
36
0
18
1.50
13044--13068
6
4.2
6
100
0
50
32
36
0
32
1.58
25643--25688
16
3.1
16
75
18
53
54
0
0
45
0.99
25644--25723
34
2.4
33
79
8
90
50
2
0
47
1.14
27911--27938
3
9.3
3
100
0
56
0
32
0
67
0.91
31821--32463
225
3.0
217
80
5
728
18
27
10
42
1.84
32059--32454
210
1.9
211
84
3
528
18
28
11
42
1.84
34163--34195
14
2.4
14
90
5
50
24
0
3
72
0.98
41182--41222
19
2.4
16
88
12
55
36
2
2
58
1.24
41180--41250
29
2.4
31
81
9
76
36
5
2
54
1.38
41826--41873
23
2.1
23
84
7
62
56
4
4
35
1.38
47306--47351
18
2.6
18
82
0
56
28
2
4
65
1.23
52748--52777
15
2.0
15
93
0
51
26
30
6
36
1.82
54035--54081
20
2.3
20
96
0
85
27
6
21
44
1.76
59236--59279
22
2.0
22
100
0
88
45
13
0
40
1.44
59273--59317
2
23.0
2
93
4
74
51
0
2
46
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
70870--70898
2
14.5
2
100
0
58
51
0
0
48
1.00
71189--71256
22
3.2
21
82
15
86
4
1
26
67
1.18
71189--71271
42
1.9
44
83
9
109
4
2
22
69
1.19
92579--92610
12
2.7
12
90
0
55
21
34
9
34
1.86

Tables:   1

The End!