Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008692.1 Kokia drynarioides strain JFW-HI SEQ_123374, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76308

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2041--2081
3
13.7
3
100
0
82
34
31
0
34
1.58
2080--2106
3
9.0
3
100
0
54
33
0
0
66
0.92
2716--2758
18
2.4
18
80
7
52
46
2
0
51
1.13
3042--3078
18
2.1
18
90
10
58
35
5
0
59
1.20
7114--7160
24
1.9
25
86
4
69
51
2
0
46
1.13
8549--8601
23
2.3
23
80
6
63
33
1
0
64
1.05
16665--16690
7
3.7
7
100
0
52
46
0
30
23
1.53
16699--16734
5
7.6
5
96
3
58
41
0
36
22
1.54
20484--20514
16
1.9
16
100
0
62
0
6
0
93
0.35
20490--20514
13
1.9
13
100
0
50
0
4
0
96
0.24
22301--22344
19
2.3
19
80
11
54
29
4
9
56
1.50
34578--34628
12
4.5
11
79
16
50
5
11
0
82
0.83
34581--34618
11
3.4
11
88
3
58
7
5
0
86
0.69
34581--34625
15
2.9
15
80
9
54
6
8
0
84
0.78
34578--34630
23
2.3
23
80
6
63
5
13
0
81
0.86
46656--46736
20
4.4
19
71
10
69
30
1
0
67
0.98
46664--46738
35
2.1
34
81
11
89
30
1
0
68
0.98
46656--46737
9
8.9
9
70
14
60
30
1
0
68
0.98
52299--52327
8
3.6
8
100
0
58
20
0
0
79
0.74
52325--52351
12
2.2
12
100
0
54
0
37
0
62
0.95
55485--55626
68
2.1
68
95
0
266
51
23
8
16
1.71
58259--58292
15
2.1
15
89
10
50
76
0
0
23
0.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58259--58292
16
2.1
17
88
5
52
76
0
0
23
0.79
69861--69932
21
3.4
21
88
3
108
20
18
11
50
1.77
69864--69930
22
3.1
22
89
2
100
20
19
8
50
1.74
73900--73944
20
2.2
20
84
7
56
55
11
0
33
1.35
74779--74846
20
3.3
20
73
15
66
39
5
1
52
1.34

Tables:   1

The End!