Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01008712.1 Kokia drynarioides strain JFW-HI SEQ_123394, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 6015
ACGTcount: A:0.31, C:0.16, G:0.18, T:0.35


Found at i:2597 original size:17 final size:17

Alignment explanation


    Indices: 2575--2607  Score: 66
    Period size: 17  Copynumber: 1.9  Consensus size: 17

       2565 TGTTAGTACA

                             
       2575 CATTGTCATTGCATTTC
          1 CATTGTCATTGCATTTC

                            
       2592 CATTGTCATTGCATTT
          1 CATTGTCATTGCATTT

       2608 TAGTGTTAGT


Statistics
Matches: 16,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  17   16  1.00

ACGTcount: A:0.18, C:0.21, G:0.12, T:0.48


Consensus pattern (17 bp):   
CATTGTCATTGCATTTC
Done.