Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01008737.1 Kokia drynarioides strain JFW-HI SEQ_123419, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3574
ACGTcount: A:0.27, C:0.21, G:0.18, T:0.34


Found at i:3384 original size:14 final size:14

Alignment explanation


    Indices: 3365--3393  Score: 58
    Period size: 14  Copynumber: 2.1  Consensus size: 14

       3355 GCTTTCCTGA

                          
       3365 TATGGCTCCGAAAG
          1 TATGGCTCCGAAAG

                          
       3379 TATGGCTCCGAAAG
          1 TATGGCTCCGAAAG

             
       3393 T
          1 T

       3394 GCACTTTGCT


Statistics
Matches: 15,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   15  1.00

ACGTcount: A:0.28, C:0.21, G:0.28, T:0.24


Consensus pattern (14 bp):   
TATGGCTCCGAAAG
Done.