Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008740.1 Kokia drynarioides strain JFW-HI SEQ_123422, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  120446

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8961--9050
30
3.1
30
83
3
112
32
7
7
52
1.59
27337--27795
8
57.5
8
71
9
195
49
0
4
45
1.28
27512--27699
58
3.2
56
86
10
261
49
0
5
44
1.29
27402--27699
160
1.8
165
93
5
525
48
0
5
45
1.30
27578--27776
42
4.5
42
76
14
204
46
0
6
47
1.27
27402--27741
160
2.2
156
88
6
503
47
0
5
45
1.30
27730--27821
26
3.5
26
77
11
105
47
0
5
46
1.25
27578--27825
136
1.9
130
89
6
390
46
0
6
47
1.27
27977--28016
19
2.0
20
90
4
64
32
0
2
65
1.06
37313--37420
49
2.2
49
80
11
130
35
2
26
35
1.71
37532--37642
42
2.6
43
81
5
136
21
17
16
45
1.86
37621--37699
41
1.9
41
89
0
122
18
18
16
45
1.86
39089--39171
43
1.9
43
85
0
112
25
26
12
36
1.91
39144--39406
41
6.4
41
84
1
305
23
26
15
33
1.95
40634--40677
21
2.1
21
100
0
88
34
9
13
43
1.76
50128--50185
21
2.8
21
81
5
55
27
24
13
34
1.93
56716--56955
51
4.6
52
79
10
235
33
15
22
27
1.95
56720--56955
103
2.3
104
82
7
284
33
16
22
27
1.95
61701--61772
27
2.6
28
77
18
80
12
5
5
76
1.14
61718--61765
17
2.7
18
83
3
62
10
4
6
79
1.05
62785--62831
12
3.8
12
76
13
51
74
8
4
12
1.19
71197--71234
18
2.1
18
95
0
67
26
15
15
42
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74629--74743
42
2.7
41
81
7
126
25
25
11
38
1.89
76279--76305
14
1.9
14
100
0
54
29
3
7
59
1.42
77899--77942
21
2.1
21
83
8
54
25
13
4
56
1.56
83344--83403
27
2.2
27
90
0
93
51
11
15
21
1.74
84416--84453
11
3.4
11
89
7
58
57
21
7
13
1.60
84416--84446
12
2.7
12
95
5
55
61
16
6
16
1.54
86298--86365
33
2.1
33
94
0
118
50
26
2
20
1.63
86305--86377
33
2.2
33
85
4
94
53
24
4
17
1.61
86558--86594
17
2.2
17
95
0
65
51
16
2
29
1.58
86870--86987
47
2.5
47
88
2
166
59
16
2
22
1.49
104504--104534
16
1.9
16
93
0
53
61
0
16
22
1.34
105499--105579
37
2.2
37
82
8
110
25
17
30
25
1.97
108783--108813
16
1.9
16
93
0
53
61
0
16
22
1.34
109757--109835
37
2.1
37
92
0
131
21
15
31
31
1.94
118584--118619
12
3.0
12
91
0
54
47
44
2
5
1.41
118813--118886
22
3.3
23
85
10
93
41
21
13
22
1.88

Tables:   1

The End!