Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008810.1 Kokia drynarioides strain JFW-HI SEQ_123493, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  166952

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3203--3251
23
2.1
24
84
3
64
40
2
6
51
1.38
13161--13230
35
2.0
35
94
0
122
25
11
10
52
1.68
29376--29402
3
9.0
3
100
0
54
0
33
0
66
0.92
30026--30069
8
5.5
8
77
0
52
50
13
2
34
1.55
34586--34661
39
1.9
39
100
0
152
47
9
10
32
1.70
39919--40029
24
4.6
24
89
0
159
27
11
9
52
1.67
41019--41068
22
2.3
22
89
0
73
28
6
20
46
1.74
47032--47096
31
2.1
32
85
2
87
52
16
6
24
1.67
57635--57678
19
2.2
20
88
4
63
56
0
0
43
0.99
63652--63962
153
2.0
153
95
0
559
30
16
23
29
1.96
67360--67391
9
3.6
9
95
0
55
50
9
6
34
1.60
77128--77207
29
2.6
30
86
5
99
31
10
16
42
1.81
84790--84890
22
4.6
22
98
0
193
18
4
11
64
1.44
88742--89135
197
2.0
197
97
0
743
40
16
12
30
1.85
99140--99172
16
2.1
16
94
0
57
66
0
3
30
1.06
99131--99195
24
2.7
24
78
4
69
69
1
3
26
1.12
104621--104661
21
1.9
21
85
5
55
24
7
2
65
1.30
107610--107683
8
9.8
8
71
14
50
36
0
1
62
1.04
109810--109840
16
1.9
16
100
0
62
25
35
12
25
1.92
120603--120712
56
2.0
56
100
0
220
24
14
20
40
1.89
122966--123069
34
3.1
34
91
0
172
34
18
10
36
1.85
128311--128559
83
3.0
83
95
0
426
35
23
11
29
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
130092--130247
38
4.1
38
94
0
285
43
22
12
21
1.85
134281--134319
19
2.1
19
85
0
51
10
2
10
76
1.10
137329--137362
18
1.9
17
88
5
50
55
0
2
41
1.15
138843--139038
95
2.1
92
81
4
241
56
7
5
31
1.49
154900--154929
15
1.9
16
93
6
53
3
16
0
80
0.85
162549--162581
15
2.2
15
94
0
57
21
18
33
27
1.96
166552--166586
11
2.9
12
87
12
54
71
14
5
8
1.29
166800--166861
9
7.0
9
70
23
51
62
0
35
1
1.05
166795--166860
4
16.2
4
76
9
53
65
0
33
1
1.02
166794--166860
13
4.8
13
77
14
62
64
0
34
1
1.03

Tables:   1

The End!