Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008821.1 Kokia drynarioides strain JFW-HI SEQ_123505, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85906

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5249--5358
54
2.1
53
82
5
132
40
4
5
49
1.46
5363--5413
20
2.5
21
73
20
54
52
1
3
41
1.31
5349--5414
20
3.3
20
74
6
53
51
1
3
43
1.26
25393--25558
23
7.1
23
77
8
156
15
20
20
43
1.87
25558--25604
22
2.1
23
88
4
69
12
21
17
48
1.79
28741--28833
23
4.1
23
77
1
107
46
10
23
19
1.81
28746--28833
46
1.9
45
86
2
122
47
10
22
19
1.79
29356--29408
22
2.3
22
83
6
61
33
13
13
39
1.83
29573--29615
3
14.3
3
100
0
86
67
0
0
32
0.91
34281--34572
52
5.6
52
87
1
370
25
14
23
36
1.93
39467--39621
79
2.0
78
84
3
204
39
9
14
36
1.79
42466--42530
30
2.2
30
97
0
121
21
4
16
56
1.58
46112--46169
28
2.0
30
86
6
84
27
3
5
63
1.31
51582--51619
17
2.2
18
85
4
51
57
2
5
34
1.35
58504--58559
25
2.2
26
78
12
62
35
0
8
55
1.31
59161--59185
9
2.8
9
100
0
50
92
0
8
0
0.40
62840--62874
2
17.5
2
100
0
70
0
51
0
48
1.00
79133--79187
25
2.2
25
81
12
60
58
1
1
38
1.20
79454--79663
104
2.0
104
98
0
402
27
21
20
30
1.98
81096--81123
3
9.3
3
100
0
56
32
0
0
67
0.91

Tables:   1

The End!