Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008851.1 Kokia drynarioides strain JFW-HI SEQ_123537, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55199

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1136--1191
17
3.3
16
87
9
76
57
1
0
41
1.09
5573--5632
32
1.9
32
86
6
88
35
5
5
55
1.44
15711--15740
4
7.5
4
100
0
60
76
23
0
0
0.78
26392--26429
14
2.5
15
83
12
51
60
0
0
39
0.97
30795--30833
14
2.8
14
88
0
51
53
2
5
38
1.37
31234--31274
21
2.0
21
95
0
73
21
21
29
26
1.99
32516--32548
3
11.0
3
100
0
66
0
33
0
66
0.92
35070--35115
8
5.5
8
82
10
56
73
4
0
21
1.00
36827--37231
134
3.2
130
82
10
487
14
15
25
44
1.84
37007--37230
64
3.5
63
72
18
205
13
16
25
45
1.83
39196--39223
3
9.3
3
100
0
56
67
32
0
0
0.91
39223--39248
3
8.7
3
100
0
52
65
0
0
34
0.93
39540--39564
12
2.1
12
100
0
50
40
16
8
36
1.77
42280--42344
29
2.3
27
79
7
67
55
7
10
26
1.61
42889--42914
12
2.2
12
100
0
52
23
7
23
46
1.78
49424--49458
18
1.9
18
88
0
52
11
5
2
80
1.00
49737--49775
3
13.0
3
94
0
69
64
0
0
35
0.94
51733--51768
17
2.1
17
100
0
72
41
5
16
36
1.72

Tables:   1

The End!