Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01000886.1 Kokia drynarioides strain JFW-HI SEQ_112009, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59537

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4490--4645
82
1.9
82
91
0
258
22
21
25
30
1.98
5340--5374
18
1.9
18
88
11
54
45
14
5
34
1.68
8281--8584
10
32.6
9
66
19
90
57
2
2
36
1.28
8472--8584
9
11.8
9
71
18
77
58
2
1
37
1.23
8475--8583
29
3.8
29
69
25
79
57
2
1
37
1.24
8472--8584
48
2.3
47
81
14
133
58
2
1
37
1.23
8472--8585
49
2.4
48
78
14
128
58
2
1
36
1.22
9163--9197
17
2.0
18
88
5
54
25
8
0
65
1.21
13164--13217
15
3.6
15
77
5
56
59
5
0
35
1.21
19425--19474
21
2.3
22
83
13
59
24
18
20
38
1.93
19796--19876
30
2.7
30
88
0
108
53
14
8
23
1.69
23030--23062
15
2.2
15
94
0
57
12
21
21
45
1.84
25954--25993
14
2.7
16
81
14
50
17
5
15
62
1.49
27177--27240
26
2.4
25
85
12
76
28
1
3
67
1.15
27194--27240
24
1.9
23
87
12
67
25
0
2
72
0.96
29767--29795
15
2.0
15
93
6
51
75
0
0
24
0.80
33323--33355
7
4.7
7
100
0
66
72
0
0
27
0.85
33900--33924
12
2.1
12
100
0
50
56
0
44
0
0.99
40253--40455
28
7.7
28
72
8
106
36
18
24
20
1.94
40361--40427
24
2.8
24
90
0
107
34
19
29
16
1.94
40385--40530
52
2.8
52
80
1
184
39
19
23
18
1.93
40496--40543
24
2.0
24
84
8
62
43
16
20
18
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43869--43935
19
3.4
19
78
14
64
41
0
0
58
0.98
44513--44547
18
1.9
18
88
0
52
28
5
0
65
1.15
46193--46254
29
2.1
29
84
0
79
50
9
8
32
1.65
49340--49375
17
2.1
18
94
5
65
52
5
0
41
1.24
51118--51308
60
3.2
60
84
2
231
23
15
13
47
1.80
51508--51646
31
4.5
32
73
16
123
51
10
13
24
1.73
53019--53043
13
1.9
13
100
0
50
72
0
0
28
0.86
53023--53065
22
2.0
22
85
0
59
65
6
0
27
1.18
53383--53444
30
2.1
30
100
0
124
22
24
22
30
1.99
59081--59166
4
21.2
4
77
11
77
65
0
34
0
0.93
59081--59166
16
5.3
17
78
8
99
65
0
34
0
0.93
59103--59165
20
3.1
20
90
2
99
65
0
34
0
0.93

Tables:   1

The End!