Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008874.1 Kokia drynarioides strain JFW-HI SEQ_123560, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78066

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9913--10167
29
8.7
30
71
11
181
40
5
25
29
1.77
9948--10164
60
3.7
59
83
8
255
41
5
25
28
1.76
9905--10342
58
7.6
59
78
10
367
40
3
24
31
1.72
10074--10279
109
1.9
108
84
5
272
44
2
22
30
1.68
10016--10335
166
1.9
166
84
5
423
41
3
24
30
1.71
10181--10340
29
5.5
29
72
11
139
40
1
23
35
1.63
11419--11487
3
23.0
3
73
5
59
37
1
0
60
1.06
12220--12279
6
10.3
6
71
7
52
56
3
1
38
1.26
12220--12291
18
4.1
18
87
5
94
58
4
1
36
1.26
12766--13153
96
4.0
95
75
10
268
15
23
20
40
1.91
12837--13153
49
6.5
49
74
9
224
15
24
20
40
1.90
13400--13434
18
1.9
18
88
0
52
54
11
11
22
1.68
24462--24524
28
2.2
28
91
0
99
33
7
25
33
1.85
24488--24608
57
2.1
58
85
1
163
36
7
23
32
1.83
24606--24759
59
2.6
58
83
4
175
38
3
23
33
1.73
24665--24759
29
3.2
30
73
10
97
38
2
23
35
1.67
24472--24747
29
9.5
30
66
20
86
38
5
24
31
1.79
25948--25978
6
5.0
6
96
4
53
80
0
0
19
0.71
26632--26712
17
4.8
16
80
10
81
55
3
1
39
1.25
26647--26712
18
3.7
18
84
11
84
59
4
0
36
1.18
26685--26731
12
3.9
12
82
0
58
63
2
0
34
1.06
26680--26730
24
2.1
24
92
0
84
62
1
0
35
1.06
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26620--26714
17
5.4
17
74
14
68
53
3
2
41
1.28
26620--26718
6
16.8
6
71
12
71
54
3
2
40
1.27
26647--26712
17
3.8
17
85
4
87
59
4
0
36
1.18
33172--33219
25
1.9
25
100
0
96
54
6
0
39
1.26
41497--41546
25
2.1
23
82
10
57
52
2
0
46
1.12
52250--52312
31
2.0
31
87
0
90
57
7
0
34
1.28
56525--56563
18
2.2
18
86
4
53
38
7
10
43
1.67
60974--61016
21
2.1
20
82
4
50
51
9
0
39
1.34
61773--61798
3
8.7
3
100
0
52
0
0
30
69
0.89
64064--64106
22
2.0
21
86
4
59
34
0
0
65
0.93
64205--64257
18
3.1
17
75
5
54
64
1
0
33
1.05
64435--64473
20
2.0
20
90
10
62
48
0
5
46
1.24
66763--66825
32
2.0
32
90
3
101
47
14
11
26
1.77
70999--71050
18
2.8
18
76
2
59
32
11
5
50
1.62
76072--76104
17
1.9
17
93
0
57
45
0
36
18
1.49

Tables:   1

The End!