Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01008877.1 Kokia drynarioides strain JFW-HI SEQ_123563, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2679
ACGTcount: A:0.27, C:0.17, G:0.23, T:0.34


Found at i:1638 original size:15 final size:15

Alignment explanation


    Indices: 1618--1646  Score: 58
    Period size: 15  Copynumber: 1.9  Consensus size: 15

       1608 TGTCTGACTT

                           
       1618 GTCTACTGGTGCAAG
          1 GTCTACTGGTGCAAG

                          
       1633 GTCTACTGGTGCAA
          1 GTCTACTGGTGCAA

       1647 AGTTTGCTCA


Statistics
Matches: 14,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  15   14  1.00

ACGTcount: A:0.21, C:0.21, G:0.31, T:0.28


Consensus pattern (15 bp):   
GTCTACTGGTGCAAG
Done.