Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008882.1 Kokia drynarioides strain JFW-HI SEQ_123569, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44012

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--82
2
43.5
2
84
11
111
52
0
1
46
1.08
2648--2686
20
2.0
19
85
5
51
48
0
35
15
1.45
4488--4512
2
12.5
2
100
0
50
52
0
0
48
1.00
7233--7265
3
11.0
3
100
0
66
33
0
0
66
0.92
9314--9355
20
2.1
20
95
0
75
21
28
4
45
1.72
10509--10544
16
2.2
16
95
0
63
22
5
13
58
1.56
11445--11538
26
3.4
27
68
24
79
63
3
19
13
1.42
11444--11540
28
3.5
28
71
19
94
63
3
18
14
1.42
11472--11559
26
3.0
30
63
27
71
59
3
19
18
1.52
11446--11559
57
2.0
57
96
0
210
60
3
19
16
1.50
11459--11553
27
3.4
27
71
19
88
60
4
20
15
1.52
16805--16961
78
2.0
78
98
0
305
33
13
25
28
1.93
17215--17298
37
2.3
37
87
0
114
29
30
17
21
1.96
18250--18280
16
1.9
16
93
0
53
22
16
0
61
1.34
21838--21948
37
3.0
37
76
10
102
31
21
15
31
1.94
21944--21993
26
1.9
26
87
0
73
30
22
18
30
1.97
27255--27305
21
2.4
21
83
6
68
25
15
27
31
1.96
34192--34226
17
2.1
17
94
5
63
51
0
17
31
1.45
34306--34344
19
2.1
19
95
0
69
46
5
15
33
1.68
37186--37229
21
2.1
21
95
0
79
40
2
15
40
1.60
37202--37292
33
2.7
35
80
13
102
36
5
16
41
1.72
38157--38617
241
1.9
241
87
2
676
45
7
7
39
1.60
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38576--38619
20
2.3
19
84
4
52
54
4
4
36
1.41
39299--39368
30
2.5
28
80
17
74
22
2
24
50
1.63
41194--41231
15
2.4
16
95
4
69
42
0
0
57
0.98
42598--42789
96
2.0
96
80
8
212
35
13
21
30
1.91
43099--43408
29
10.7
30
79
12
328
32
1
27
38
1.65
43177--43223
22
2.2
22
92
3
78
38
0
19
42
1.51
43148--43252
51
2.1
51
83
3
131
33
0
24
40
1.62
43099--43408
110
2.7
110
81
10
317
32
1
27
38
1.65

Tables:   1

The End!