Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01008919.1 Kokia drynarioides strain JFW-HI SEQ_123610, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 5388
ACGTcount: A:0.33, C:0.14, G:0.19, T:0.34


Found at i:4628 original size:15 final size:15

Alignment explanation


    Indices: 4608--4637  Score: 60
    Period size: 15  Copynumber: 2.0  Consensus size: 15

       4598 GCTAAGTGAT

                           
       4608 AACATGGTGATTGAA
          1 AACATGGTGATTGAA

                           
       4623 AACATGGTGATTGAA
          1 AACATGGTGATTGAA

       4638 GCATGAAATT


Statistics
Matches: 15,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  15   15  1.00

ACGTcount: A:0.40, C:0.07, G:0.27, T:0.27


Consensus pattern (15 bp):   
AACATGGTGATTGAA
Done.