Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008957.1 Kokia drynarioides strain JFW-HI SEQ_123653, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  121438

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6786--6811
2
13.0
2
100
0
52
50
0
0
50
1.00
7639--7714
27
2.8
27
87
0
107
26
25
15
32
1.95
14240--14268
6
4.8
6
100
0
58
0
65
0
34
0.93
28358--28442
28
3.0
28
75
17
86
61
2
3
32
1.26
31050--31130
31
2.6
31
80
5
85
37
9
9
43
1.71
34706--34737
16
1.9
17
93
6
57
34
0
0
65
0.93
34704--34743
17
2.4
17
83
8
55
42
0
0
57
0.98
34733--34785
26
2.1
25
82
10
63
62
1
0
35
1.06
48726--48768
19
2.3
19
84
8
52
58
4
0
37
1.19
49117--49149
16
2.1
16
94
5
59
48
0
15
36
1.45
50800--50869
31
2.2
30
79
18
72
35
4
8
51
1.52
51619--51685
30
2.3
29
81
2
80
31
4
8
55
1.51
53056--53100
23
2.0
23
82
8
56
28
13
4
53
1.59
58057--58117
14
4.4
14
89
4
52
0
44
0
55
0.99
58078--58119
7
6.0
7
97
0
75
0
54
0
45
0.99
59570--59610
15
2.6
16
88
3
57
39
0
0
60
0.96
59573--59611
16
2.4
17
83
12
55
38
0
0
61
0.96
66013--66040
14
2.0
14
100
0
56
14
42
14
28
1.84
75552--75652
53
1.9
53
86
8
143
42
5
0
50
1.33
76258--76313
18
3.2
18
90
5
80
37
5
0
57
1.22
77982--78193
58
3.6
58
80
9
243
34
16
21
27
1.94
77990--78221
58
3.9
58
78
11
204
34
16
21
28
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
77990--78221
118
2.0
118
86
1
322
34
16
21
28
1.95
77982--78230
57
4.3
57
77
9
207
34
15
20
29
1.93
86359--86383
5
5.0
5
100
0
50
60
0
20
20
1.37
88061--88085
13
1.9
13
100
0
50
36
8
8
48
1.62
88060--88119
31
1.9
31
86
0
84
26
15
6
51
1.67
89455--89495
12
3.3
13
80
13
50
65
0
0
34
0.93
91358--91453
29
3.3
29
71
8
95
35
7
23
33
1.83
91290--91452
59
2.7
59
85
2
202
40
7
22
28
1.82
91434--91720
30
9.7
29
75
12
185
37
2
23
36
1.67
91350--91722
59
6.3
60
79
7
279
38
3
23
34
1.73
107059--107124
29
2.2
30
86
7
91
63
6
0
30
1.18
109209--109247
19
2.1
19
85
9
53
38
0
2
58
1.12
117801--117863
26
2.4
26
94
0
108
55
9
15
19
1.67
120118--120153
2
18.0
2
100
0
72
50
0
0
50
1.00
121024--121110
43
2.0
43
93
2
149
48
6
16
28
1.71

Tables:   1

The End!