Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008994.1 Kokia drynarioides strain JFW-HI SEQ_123692, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61496

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
794--1197
29
13.8
29
71
15
264
36
30
2
29
1.73
820--1199
59
6.5
59
82
4
364
35
31
3
29
1.73
814--1199
117
3.3
115
81
6
397
35
31
3
30
1.73
5726--5828
50
2.1
49
88
1
152
49
8
1
39
1.45
6451--6496
13
3.5
13
85
8
67
36
4
6
52
1.47
6451--6488
12
3.1
12
92
3
58
36
2
7
52
1.45
6453--6504
25
2.0
26
89
10
81
36
5
5
51
1.50
7948--7987
21
1.9
21
89
0
62
27
25
17
30
1.97
21197--21258
30
2.1
30
93
0
106
56
14
4
24
1.58
29434--29525
46
2.0
46
100
0
184
41
6
23
28
1.79
31040--31068
3
9.7
3
100
0
58
34
0
0
65
0.93
38598--38644
21
2.2
21
85
7
60
19
10
6
63
1.47
43101--43143
20
2.2
19
83
4
50
2
30
13
53
1.53
49948--49984
18
2.1
18
100
0
74
27
21
18
32
1.97
53342--53530
43
4.3
43
72
15
145
24
25
12
37
1.91
53342--53472
42
3.1
44
80
10
132
25
25
12
35
1.92
54983--55056
37
2.0
37
94
0
130
24
21
27
27
1.99
55319--55432
57
2.0
57
92
0
192
31
18
14
35
1.91
59879--59931
21
2.5
21
93
0
97
28
26
13
32
1.93
60297--60515
43
5.2
42
82
3
217
26
28
11
33
1.91
60290--60453
85
1.9
85
85
2
222
28
26
10
34
1.89
60296--60476
85
2.1
85
81
4
204
27
27
11
34
1.90

Tables:   1

The End!