Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009000.1 Kokia drynarioides strain JFW-HI SEQ_123698, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54151

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3552--3732
57
3.1
57
84
7
231
27
18
7
47
1.74
5519--5565
3
15.7
3
91
8
78
65
2
0
31
1.04
5655--5696
17
2.4
17
88
11
59
45
4
0
50
1.23
12556--12598
17
2.5
17
82
14
52
51
2
25
20
1.60
12571--12615
24
1.9
23
86
4
63
51
2
31
15
1.56
18614--18662
21
2.3
21
82
6
55
51
0
4
44
1.20
18664--18702
18
2.2
18
86
9
53
38
5
2
53
1.37
22345--22522
52
3.4
52
85
4
227
32
25
15
27
1.95
32218--32248
2
15.5
2
100
0
62
48
0
0
51
1.00
37912--38036
44
2.9
43
84
4
164
40
16
25
17
1.90
39490--39579
42
2.2
41
84
6
110
43
12
24
20
1.85
39665--39709
15
3.0
15
90
0
63
33
22
2
42
1.66
40665--40699
18
1.9
18
88
0
52
34
5
25
34
1.80
41028--41063
16
2.2
16
90
0
54
33
25
16
25
1.96
45429--45462
16
2.1
17
88
5
52
41
23
11
23
1.87
46673--46697
13
1.9
13
100
0
50
40
4
24
32
1.73
47613--47651
8
5.1
8
81
12
55
35
0
0
64
0.94
47661--47754
14
6.9
14
67
24
58
50
6
0
43
1.28
47607--47759
68
2.2
68
89
4
229
47
6
0
45
1.33
47578--47703
54
2.3
55
82
8
141
45
5
0
48
1.31
50003--50142
43
3.3
43
85
0
181
30
15
26
27
1.96
50211--50286
39
1.9
39
84
5
100
48
0
5
46
1.24
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51470--51586
31
3.9
31
73
15
118
25
14
11
48
1.77
51470--51664
91
2.1
91
83
3
232
25
12
11
50
1.74
51846--51914
30
2.3
30
82
9
86
59
14
4
21
1.53
54077--54145
33
2.1
34
86
2
95
50
5
14
28
1.66

Tables:   1

The End!