Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009010.1 Kokia drynarioides strain JFW-HI SEQ_123708, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35957

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1553--1586
6
5.5
6
86
6
50
76
0
0
23
0.79
2106--2136
2
15.5
2
100
0
62
48
0
0
51
1.00
3504--3548
10
4.4
11
75
13
51
57
0
0
42
0.98
6216--6259
19
2.3
19
88
0
61
15
15
40
27
1.88
7406--7456
24
2.1
25
85
10
70
11
11
43
33
1.78
7470--7534
22
3.0
22
82
8
71
12
0
35
52
1.39
11152--11176
2
12.5
2
100
0
50
52
0
0
48
1.00
17492--17605
57
2.0
57
96
0
210
32
29
8
28
1.87
18555--18581
13
2.1
13
100
0
54
70
0
0
29
0.88
19599--19640
14
3.1
13
89
6
57
30
21
23
23
1.99
19709--19762
22
2.5
22
84
6
65
11
3
33
51
1.55
25096--25163
28
2.4
28
90
0
100
25
17
22
35
1.95
32097--32137
16
2.8
14
86
13
64
48
2
0
48
1.14
32382--32469
44
1.9
47
90
6
146
27
14
13
44
1.83
35278--35317
13
3.2
13
82
13
57
47
0
0
52
1.00
35270--35329
24
2.5
24
75
0
66
45
0
0
55
0.99
35279--35328
11
4.4
11
87
5
55
48
0
0
52
1.00

Tables:   1

The End!