Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009038.1 Kokia drynarioides strain JFW-HI SEQ_123736, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69074

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1405--1449
20
2.2
20
100
0
90
44
4
8
42
1.56
2889--2924
18
2.0
18
94
0
63
30
16
16
36
1.91
4216--4255
20
2.0
20
95
0
71
30
12
22
35
1.91
4333--4374
21
2.0
22
90
4
68
47
0
2
50
1.14
4414--4464
19
2.8
18
82
11
59
58
0
0
41
0.98
4370--4463
37
2.5
37
76
11
93
53
0
4
42
1.20
4394--4460
10
7.3
9
71
18
50
55
0
2
41
1.15
4558--4611
20
2.8
20
82
2
65
37
3
0
59
1.15
5815--5868
28
1.9
28
84
0
72
59
9
11
20
1.59
6249--6292
23
1.9
23
90
0
70
6
9
6
77
1.13
12737--12761
2
12.5
2
100
0
50
48
0
0
52
1.00
14067--14367
75
4.0
77
88
5
409
47
8
16
28
1.75
14067--14359
154
1.9
150
88
4
435
47
7
16
28
1.75
16275--16309
18
1.9
18
88
0
52
77
0
5
17
0.96
17293--17330
16
2.4
16
90
0
58
50
0
13
36
1.42
17497--17647
56
2.6
57
83
10
191
52
2
1
43
1.23
20340--20372
11
3.0
11
90
0
57
63
0
12
24
1.28
31266--31313
24
2.0
24
84
8
62
68
2
0
29
1.01
32764--32788
2
12.5
2
100
0
50
52
0
0
48
1.00
33026--33050
11
2.3
11
100
0
50
92
0
8
0
0.40
42233--42316
44
1.9
44
90
0
132
10
11
27
50
1.72
42361--42547
94
2.0
94
100
0
374
25
12
20
41
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60309--60372
30
2.1
32
91
5
105
25
10
10
53
1.68
60554--60607
28
1.9
28
88
0
81
50
7
7
35
1.59
60561--60696
61
2.3
60
83
5
168
47
11
16
25
1.80
60586--60726
59
2.4
59
82
4
158
48
11
18
21
1.79
64132--64209
39
2.0
39
84
0
102
29
16
14
39
1.88

Tables:   1

The End!