Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009087.1 Kokia drynarioides strain JFW-HI SEQ_123787, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83219

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29110--29171
23
2.7
23
89
0
88
50
20
11
17
1.77
29576--29614
18
2.1
19
85
4
53
64
0
0
35
0.94
29717--29741
10
2.5
10
100
0
50
0
20
32
48
1.50
29894--29949
21
2.7
21
77
5
60
57
5
35
1
1.32
30006--30571
207
2.8
207
91
3
916
43
7
7
41
1.62
30378--30750
184
2.0
183
96
1
694
40
7
8
43
1.64
33049--33105
20
2.9
20
77
12
57
29
3
7
59
1.40
36251--36302
25
2.0
26
88
3
79
23
17
3
55
1.58
36766--36836
27
2.6
27
100
0
142
9
22
33
33
1.87
37367--37394
7
4.0
7
100
0
56
42
0
57
0
0.99
39149--39226
39
2.0
39
97
0
147
41
8
16
33
1.80
58893--59147
29
8.8
30
74
14
173
37
25
2
34
1.70
58936--59077
56
2.5
57
81
10
175
36
25
2
35
1.71
58893--59164
58
4.7
57
75
12
191
36
25
2
35
1.71
59276--59317
14
2.9
15
77
22
54
19
9
4
66
1.38
59440--59630
97
2.0
97
90
0
301
24
19
18
36
1.95
71043--71721
39
17.4
39
70
8
344
26
30
17
25
1.97
70993--71747
39
19.4
38
69
14
306
26
30
17
24
1.97
70992--71773
78
10.0
78
82
1
780
27
30
17
24
1.97
71632--71760
39
3.3
39
71
12
111
29
27
18
24
1.98
72190--72258
6
12.2
6
72
17
58
43
0
4
52
1.21
72193--72242
17
2.9
17
87
0
73
38
0
6
56
1.24
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72210--72258
23
2.2
22
92
3
80
40
0
6
53
1.26
73795--74111
30
10.7
30
74
10
159
34
23
3
38
1.72
73879--74080
29
6.9
30
77
8
166
32
24
4
38
1.76
73856--74107
88
2.9
87
73
10
217
34
23
3
39
1.72
74489--74533
21
2.1
21
100
0
90
28
17
17
35
1.93
74489--74540
21
2.5
21
93
0
77
26
19
19
34
1.95
77569--77715
74
2.0
74
90
0
231
41
12
12
34
1.80
83053--83078
6
4.3
6
100
0
52
15
0
50
34
1.45

Tables:   1

The End!