Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01009088.1 Kokia drynarioides strain JFW-HI SEQ_123788, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2868
ACGTcount: A:0.32, C:0.18, G:0.17, T:0.34


Found at i:2464 original size:6 final size:6

Alignment explanation


    Indices: 2453--2480  Score: 56
    Period size: 6  Copynumber: 4.7  Consensus size: 6

       2443 ATGTTGTGGT

                                            
       2453 ATCACC ATCACC ATCACC ATCACC ATCA
          1 ATCACC ATCACC ATCACC ATCACC ATCA

       2481 GGGCTGGGCT


Statistics
Matches: 22,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   22  1.00

ACGTcount: A:0.36, C:0.46, G:0.00, T:0.18


Consensus pattern (6 bp):   
ATCACC

Done.