Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009177.1 Kokia drynarioides strain JFW-HI SEQ_123882, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  134489

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1395--1447
23
2.3
23
87
6
72
43
20
26
9
1.82
1408--1458
23
2.2
22
82
6
57
49
17
23
9
1.77
3556--3745
95
2.0
95
96
0
353
32
16
22
28
1.96
4317--4366
18
3.0
15
85
14
55
68
10
4
18
1.34
23461--23513
29
1.9
27
81
11
63
24
5
13
56
1.58
30266--30298
2
16.5
2
93
0
57
48
3
0
48
1.17
43965--43998
18
1.9
17
88
5
50
26
17
14
41
1.88
43975--44008
18
1.9
17
88
5
50
26
14
17
41
1.88
50837--50884
25
2.0
24
84
15
64
58
2
2
37
1.22
53111--53145
18
1.9
18
88
11
54
42
5
5
45
1.51
53171--53206
14
2.6
15
87
12
51
41
11
5
41
1.64
60389--60434
5
9.2
5
95
4
76
80
0
0
19
0.71
84803--84958
82
1.9
79
88
3
231
47
5
25
21
1.73
86451--86522
34
2.1
35
84
5
94
50
9
6
33
1.62
91249--91359
30
3.8
29
80
12
122
32
10
9
47
1.70
96706--96776
23
3.1
23
87
0
97
8
22
21
47
1.77
96738--96812
23
3.3
23
76
12
57
13
26
20
40
1.89
96775--96841
23
3.0
22
86
4
80
13
22
28
35
1.92
103944--104024
23
3.5
23
87
1
108
11
25
19
43
1.84
103942--104047
46
2.3
46
82
6
126
10
27
21
40
1.86
104039--104099
28
2.2
28
94
5
108
11
27
19
40
1.86
118705--118748
3
14.7
3
80
0
52
38
22
4
34
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
128585--128631
15
3.1
15
81
6
58
17
4
0
78
0.90

Tables:   1

The End!