Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009198.1 Kokia drynarioides strain JFW-HI SEQ_123903, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  115384

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3321--3356
17
2.1
18
89
5
56
58
0
5
36
1.22
6565--6603
6
6.5
6
100
0
78
15
0
66
17
1.25
16078--16312
45
5.2
45
85
1
283
28
22
24
23
1.99
16093--16323
90
2.6
90
86
2
313
30
21
24
23
1.99
18769--18793
6
4.2
6
100
0
50
0
16
20
64
1.30
19861--19885
13
1.9
13
100
0
50
24
0
0
76
0.80
21999--22030
16
2.0
17
88
11
50
28
0
9
62
1.26
24432--24498
29
2.2
31
84
7
93
32
14
11
40
1.83
26462--26519
17
3.7
17
69
21
63
43
22
12
22
1.86
26457--26548
29
3.2
29
89
3
132
42
21
11
23
1.86
26472--26581
29
3.8
29
85
2
132
41
18
13
26
1.87
26482--26599
29
4.1
29
82
4
98
43
16
13
26
1.85
26705--26940
40
5.9
40
73
3
199
23
16
21
38
1.92
26714--26933
80
2.8
80
87
0
314
22
17
22
37
1.94
29740--29801
17
3.9
17
72
20
62
38
22
16
22
1.92
29743--29867
29
4.3
30
81
6
136
40
20
16
22
1.91
37029--37053
2
12.5
2
100
0
50
52
0
0
48
1.00
37299--37342
13
3.3
13
81
6
52
61
0
2
36
1.09
40506--40599
44
2.1
44
96
0
170
23
37
3
36
1.71
41889--41946
4
15.0
4
82
7
75
22
0
25
51
1.48
41889--41976
8
10.8
8
81
4
59
15
2
32
48
1.58
60704--60849
60
2.5
59
81
1
175
42
17
16
23
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62893--62934
16
2.5
17
88
3
59
64
0
0
35
0.94
62893--62939
17
2.9
16
81
6
58
65
2
0
31
1.04
62970--63023
18
2.8
20
75
16
60
55
3
0
40
1.17
63165--63317
72
2.1
74
80
7
170
26
1
6
65
1.28
67732--67774
7
6.1
7
78
10
52
53
2
2
41
1.26
67790--67829
7
5.9
7
97
2
73
42
0
0
57
0.98
68093--68205
57
2.0
57
100
0
226
46
9
15
28
1.78
73608--73654
20
2.3
20
75
7
51
59
6
2
31
1.34
85397--85431
3
11.7
3
100
0
70
31
0
0
68
0.90
88493--88532
21
1.9
21
85
10
55
30
15
22
32
1.94
90167--90225
24
2.5
24
91
0
100
28
23
27
20
1.99
100681--100782
19
5.4
19
67
9
82
43
30
0
26
1.55
100684--100786
38
2.7
38
100
0
206
42
31
0
26
1.55
106721--106754
17
2.1
17
88
5
52
35
0
0
64
0.94
107233--107367
58
2.3
60
83
2
175
48
10
16
24
1.77
107269--107380
58
1.9
59
80
5
129
49
11
14
25
1.77
109847--109969
63
1.9
65
83
9
162
55
3
6
34
1.42

Tables:   1

The End!