Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009222.1 Kokia drynarioides strain JFW-HI SEQ_123927, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  96281

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
494--586
45
2.1
45
93
0
159
53
5
23
17
1.64
6090--6151
31
2.1
30
84
6
81
46
8
4
40
1.55
6762--6796
15
2.4
14
90
4
52
45
0
2
51
1.16
6790--6828
10
3.8
10
83
6
51
41
0
0
58
0.98
19859--19884
11
2.4
11
100
0
52
26
7
42
23
1.81
23234--23290
28
2.0
28
86
0
78
50
5
3
40
1.42
25249--25291
15
2.8
15
75
3
50
39
2
2
55
1.25
25377--25436
31
2.0
31
93
3
104
46
15
18
20
1.84
39709--39733
5
5.0
5
100
0
50
40
0
0
60
0.97
49410--49447
19
2.0
20
89
5
60
65
7
0
26
1.19
50724--50763
19
2.1
19
85
4
53
60
7
0
32
1.25
50712--50773
32
1.9
32
83
6
81
62
6
0
30
1.20
67957--67996
20
2.0
21
85
5
55
45
5
0
50
1.23
67977--68012
18
2.0
18
88
0
54
50
0
0
50
1.00
68661--68688
5
5.6
5
100
0
56
17
0
60
21
1.36
69336--69390
25
2.3
22
80
20
58
50
0
5
43
1.25
72569--72638
33
2.2
33
94
2
124
44
15
5
34
1.71
77151--77208
20
3.0
20
78
17
59
48
0
5
46
1.24
82814--82871
29
2.0
29
89
0
89
44
5
0
50
1.24
87409--87447
18
2.2
18
86
9
53
30
0
2
66
1.05
87514--87551
15
2.4
17
86
8
53
18
5
0
76
0.97

Tables:   1

The End!