Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009271.1 Kokia drynarioides strain JFW-HI SEQ_123976, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79748

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2969--3011
15
2.9
15
83
10
52
65
6
27
0
1.18
19173--19199
2
13.5
2
100
0
54
51
0
0
48
1.00
22772--22814
22
2.0
22
86
9
61
23
11
6
58
1.57
23298--23364
23
3.2
20
78
17
64
67
23
4
4
1.28
23298--23388
21
4.1
22
73
16
64
68
23
4
4
1.26
23355--23448
24
3.9
24
80
0
98
69
17
5
8
1.33
23350--23407
27
2.1
27
84
12
75
72
17
3
6
1.21
23379--23448
36
1.9
36
79
0
68
68
15
5
10
1.36
23299--23437
12
11.9
12
75
9
99
68
18
5
7
1.33
23467--23548
21
3.9
20
74
12
74
65
14
8
10
1.46
23467--23551
43
2.0
43
84
9
111
65
15
8
10
1.45
32045--32111
33
2.0
33
81
16
77
32
4
8
53
1.52
32941--32970
3
10.0
3
100
0
60
33
0
33
33
1.58
33780--33835
27
2.1
27
83
6
69
26
0
5
67
1.11
33776--33839
28
2.3
26
76
10
74
28
0
4
67
1.11
34514--34553
20
2.0
20
85
9
55
35
15
20
30
1.93
40261--40293
12
2.8
12
86
13
50
45
0
0
54
0.99
41668--41712
20
2.3
20
84
3
56
4
40
4
51
1.42
41930--41957
6
4.7
6
100
0
56
14
35
14
35
1.86
49522--49572
19
2.7
20
76
14
54
41
0
1
56
1.10
52135--52363
114
2.0
114
98
0
440
44
6
14
34
1.71
59065--59117
28
2.0
28
92
7
92
22
11
24
41
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59361--59403
20
2.2
19
87
4
59
39
2
2
55
1.25
62931--62983
23
2.3
23
90
0
88
26
22
5
45
1.74
73008--73072
34
1.9
34
87
6
96
38
3
7
50
1.47
73212--73236
7
3.6
7
100
0
50
44
0
0
56
0.99
73239--73295
17
3.4
17
85
9
73
33
1
8
56
1.41
73381--73421
16
2.5
17
84
7
50
43
36
0
19
1.51
78400--78479
39
2.1
39
95
0
142
32
21
15
31
1.94

Tables:   1

The End!