Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009274.1 Kokia drynarioides strain JFW-HI SEQ_123979, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74761

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1892--1980
44
2.0
44
100
0
178
42
17
8
30
1.80
9308--9339
16
2.0
16
100
0
64
50
12
6
31
1.65
10049--10107
24
2.4
25
85
5
84
40
13
40
5
1.67
10374--10412
19
2.2
19
86
9
55
64
2
5
28
1.28
25403--25435
17
1.9
17
93
0
57
24
3
0
72
0.98
25441--25517
30
2.5
31
77
14
95
61
11
1
25
1.38
25876--25933
19
3.0
17
79
20
53
29
3
3
63
1.27
26558--26601
20
2.3
19
84
11
54
56
4
6
31
1.46
42644--42688
22
2.0
24
91
8
76
28
13
8
48
1.72
42994--43095
21
4.7
21
77
12
91
8
5
14
70
1.31
42978--43050
21
3.5
20
78
10
76
8
5
13
72
1.25
43004--43071
20
3.4
19
77
6
64
10
7
11
70
1.33
42983--43071
41
2.1
43
85
8
121
10
6
12
70
1.32
43067--43104
12
3.2
12
84
0
58
2
2
21
73
1.07
43054--43148
24
4.0
24
73
4
86
9
4
18
67
1.35
43077--43163
47
1.9
47
88
6
135
11
3
18
66
1.37
44261--44301
21
2.0
20
85
4
55
51
0
0
48
1.00
44254--44339
29
2.9
28
76
15
84
47
0
1
51
1.08
49678--49712
18
2.0
17
88
5
52
34
0
0
65
0.93
58588--58869
140
2.0
141
87
0
404
35
13
19
31
1.91
63715--63748
17
2.0
17
88
0
50
11
11
5
70
1.32
70677--70720
6
7.3
6
100
0
88
34
65
0
0
0.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72020--72057
3
12.7
3
100
0
76
31
0
0
68
0.90

Tables:   1

The End!